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Update unicycler container #24536

Merged
merged 2 commits into from Sep 27, 2020
Merged

Update unicycler container #24536

merged 2 commits into from Sep 27, 2020

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nuwang
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@nuwang nuwang commented Sep 24, 2020

Running the latest container for unicycler 0.4.8 fails with Error: Unspecified error with Unicycler dependencies.
Running the container as:

docker run -it quay.io/biocontainers/unicycler:0.4.8--py38h8162308_1

and subsequently running samtools in the container, throws the following error:

samtools: error while loading shared libraries: libcrypto.so.1.0.0: cannot open shared object file: No such file or directory.

Appears to be caused by: #12100

Rebuilding the container seems to work, as samtools gets updated to v1.10, which is compatible with libssl 1.1

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nuwang and others added 2 commits September 25, 2020 00:33
Running the latest container for unicycler 0.4.8 fails with `Error: Unspecified error with Unicycler dependencies`.
Running the container as:
```
docker run -it quay.io/biocontainers/unicycler:0.4.8--py38h8162308_1
```
and subsequently running samtools in the container, throws the following error:
```
samtools: error while loading shared libraries: libcrypto.so.1.0.0: cannot open shared object file: No such file or directory.
```
Appears to be caused by: bioconda#12100

Rebuilding the container seems to work, as samtools gets updated to v1.10, which is compatible with libssl 1.1
@bgruening bgruening merged commit 86ea54e into bioconda:master Sep 27, 2020
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2 participants