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add proper tests to intervene #25392

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merged 2 commits into from Nov 17, 2020
Merged

add proper tests to intervene #25392

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9fee409
add proper tests to intervene
bernt-matthias Nov 17, 2020
86a5e7c
remove create test data (as workaround)
bernt-matthias Nov 17, 2020
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11 changes: 8 additions & 3 deletions recipes/intervene/meta.yaml
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Expand Up @@ -8,7 +8,7 @@ source:

build:
noarch: python
number: 0
number: 1
rpaths:
- lib/R/lib/
- lib/
Expand All @@ -22,8 +22,8 @@ requirements:
- bedtools >=2.29.1
- pysam >=0.15
- pybedtools
- matplotlib-base
- pandas <1.0.0
- matplotlib-base <3.4
- pandas >=1.0.0
- numpy
- scipy
- seaborn
Expand All @@ -45,6 +45,11 @@ test:
- intervene.modules.venn
commands:
- intervene --help
- intervene pairwise --test
- intervene venn --test
- intervene upset --test
# workaround for bioconda testing can not remove (PermissionError) created test data
- rm -rf Intervene_results

about:
home: https://github.com/asntech/intervene
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