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new recipe: nf-test #36823

Merged
merged 8 commits into from Sep 14, 2022
Merged

new recipe: nf-test #36823

merged 8 commits into from Sep 14, 2022

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matthdsm
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@matthdsm matthdsm commented Sep 5, 2022

New recipe for nf-test
https://code.askimed.com/nf-test/installation/


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matthdsm commented Sep 5, 2022

@BiocondaBot please add label

@BiocondaBot BiocondaBot added the please review & merge set to ask for merge label Sep 5, 2022
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rpetit3 commented Sep 6, 2022

@BiocondaBot please fetch artifacts

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Package(s) built on Azure are ready for inspection:

Arch Package Zip File
noarch nf-test-0.6.0-h4a94de4_0.tar.bz2 LinuxArtifacts

You may also use conda to install these after downloading and extracting the appropriate zip file. From the LinuxArtifacts or OSXArtifacts directories:

conda install -c packages <package name>

Docker image(s) built (images are in the LinuxArtifacts zip file above):

Package Tag Install with docker
nf-test 0.6.0--h4a94de4_0
showgzip -dc LinuxArtifacts/images/nf-test:0.6.0--h4a94de4_0.tar.gz | docker load


sed -i "s|APP_HOME=.*|APP_HOME=\"${PACKAGE_HOME}\"|g" nf-test

cp nf-test* $PACKAGE_HOME
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@matthdsm looks like there are multiple files copied over; are there any other executables that need to be symlinked as well?

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nope, there's only a jar file and the execution script!

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Can I get an approve on this so I can merge?

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LGTM 🚀

- nf-test version

about:
home: 'https://code.askimed.com/nf-test/'
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I think GitHub URLs could be here for source and issues and stuff off the top of my head? But it's minor.

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ewels commented Sep 14, 2022

@BiocondaBot please merge

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I will attempt to upload artifacts and merge this PR. This may take some time, please have patience.

@BiocondaBot BiocondaBot merged commit 37d9ce7 into master Sep 14, 2022
@BiocondaBot BiocondaBot deleted the module/nf-test branch September 14, 2022 08:34
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5 participants