-
Notifications
You must be signed in to change notification settings - Fork 50
/
index.html
126 lines (111 loc) · 5.64 KB
/
index.html
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
<!DOCTYPE html>
<html lang="en">
<head>
<meta charset="utf-8">
<title>Emperor</title>
<meta name="viewport" content="width=device-width, initial-scale=1.0">
<!-- Fav and touch icons -->
<link rel="icon" href="img/favicon.ico" type="image/x-icon" />
<link rel="shortcut icon" href="img/favicon.ico" type="image/x-icon" />
<script type="text/javascript" src="bootstrap/js/jquery-2.2.3.min.js"></script>
<script type="text/javascript" src="bootstrap/js/bootstrap.min.js"></script>
<link href="bootstrap/css/bootstrap.min.css" rel="stylesheet">
<style type="text/css">
body {
padding-top: 20px;
padding-bottom: 60px;
}
/* Custom container */
.container {
margin: 0 auto;
max-width: 1000px;
}
.container > hr {
margin: 60px 0;
}
@media (min-width: 768px) {
.navbar .navbar-nav {
display: inline-block;
float: none;
}
.navbar .navbar-collapse {
text-align: center;
}
}
</style>
<!-- GitHub ribbon -->
<a href="https://github.com/biocore/emperor"><img style="position: absolute; top: 0; right: 0; border: 0;" src="https://camo.githubusercontent.com/38ef81f8aca64bb9a64448d0d70f1308ef5341ab/68747470733a2f2f73332e616d617a6f6e6177732e636f6d2f6769746875622f726962626f6e732f666f726b6d655f72696768745f6461726b626c75655f3132313632312e706e67" alt="Fork me on GitHub" data-canonical-src="https://s3.amazonaws.com/github/ribbons/forkme_right_darkblue_121621.png"></a>
<!-- HTML5 shim, for IE6-8 support of HTML5 elements -->
<!--[if lt IE 9]>
<script src="bootstrap/js/html5shiv.js"></script>
<![endif]-->
</head>
<body>
<div class="container">
<div class="masthead">
<a href="index.html"><p align="center"><img src="img/emperor_heading.png" alt="Emperor Logo"></p></a>
<nav class="nabvar navbar-default" role="navigation">
<div class="container-fluid">
<div class="collapse navbar-collapse navbar-ex1-collapse">
<ul class="nav navbar-nav">
<li class="active"><a href="#">Home</a></li>
<li class="dropdown">
<a href="#" class="dropdown-toggle" data-toggle="dropdown" role="button" aria-haspopup="true" aria-expanded="false">Documentation<span class="caret"></span></a>
<ul class="dropdown-menu">
<li><a href="build/html/examples.html">Examples</a></li>
<li><a href="build/html/index.html">Python Documentation</a></li>
<li><a href="build/jsdoc/index.html">Javascript Documentation</a></li>
<li><a href="build/html/description.html">Description</a></li>
</ul>
</li>
<li><a href="https://nbviewer.jupyter.org/github/biocore/emperor/tree/new-api/examples/">Notebooks</a></li>
<li><a href="https://github.com/biocore/emperor/blob/new-api/INSTALL.md#emperor-installation-notes">Installation</a></li>
<li><a href="https://github.com/biocore/emperor/issues">Support</a></li>
</ul>
</div>
</div>
</nav><!-- /.navbar -->
</div>
<!-- Jumbotron -->
<div class="jumbotron">
<!-- <img src="img/emperor_heading.png" alt="Emperor">
<br><br><br><br> -->
<p class="lead" align="justify">Emperor is an interactive next generation tool for the analysis, visualization and understanding of high throughput microbial ecology datasets.
</p>
<p class="lead" align="justify">
Due to its tailor-made graphical user interface, delving into a new dataset to elucidate the patterns hidden in the data, has never been easier. Emperor brings a rich set of customizations and modifications that can be integrated into any <a href="http://qiime.org">QIIME</a> or <a href="http://scikit-bio.org">scikit-bio</a> compliant dataset; with lightweight data files and hardware accelerated graphics, constitutes itself as the state of the art for analyzing N-dimensional data using principal coordinates analysis.<br>
</p>
<p class="lead" align="justify">
If you use Emperor for any published research, please include the following citation:<br>
<blockquote>
<div align="left">
<b>EMPeror: a tool for visualizing high-throughput microbial community data</b><br>
Vazquez-Baeza Y, Pirrung M, Gonzalez A, Knight R.<br>
Gigascience. 2013 Nov 26;2(1):16.<br>
<a href="http://gigascience.biomedcentral.com/articles/10.1186/2047-217X-2-16">link to paper</a>
</div>
</blockquote>
</p>
<p class="lead" align="justify">
If you use Emperor's animations feature for a publication, please include the following citation:<br>
<blockquote>
<div align="left">
<b>Bringing the Dynamic Microbiome to Life with Animations</b><br>
Vazquez-Baeza Y, Gonzalez A, Smarr L, McDonald D, Morton J, Navas-Molina J, Knight R.<br>
Cell Host & Microbe. 2017 January 11;21(1).<br>
<a href="http://www.cell.com/cell-host-microbe/abstract/S1931-3128(16)30521-2">link to paper</a>
</div>
</blockquote>
</p>
<img src="img/sample_1.png" alt="Emperor">
<br>
</div>
<hr>
<div class="footer">
<a href="https://github.com/biocore/emperor/network/members">
<p align="center">© The Emperor Development Team</p>
</a>
</div>
</div> <!-- /container -->
</body>
</html>