Merge pull request #396 from drhodges/plottable

Very rough/incomplete code.

emperor/support_files/js/sceneplotview3d.js

@@ -0,0 +1,75 @@
+/**
+ *
+ * @author Jamie Morton, Jose Navas Molina, Andrew Hodges & Yoshiki
+ *         Vazquez-Baeza
+ * @copyright Copyright 2013--, The Emperor Project
+ * @credits Jamie Morton, Jose Navas Molina, Andrew Hodges & Yoshiki
+ *          Vazquez-Baeza
+ * @license BSD
+ * @version 0.9.51-dev
+ * @maintainer Yoshiki Vazquez Baeza
+ * @email yoshiki89@gmail.com
+ * @status Development
+ *
+ */
+
+
+/**
+ *
+ * @name ScenePlotView3D
+ *
+ * @class Represents a sample and the associated metadata in the ordination
+ * space.
+ *
+ */
+
+
+/**
+ *
+ * @name ScenePlotView3D
+ *
+ * @class Represents a sample and the associated metadata in the ordination
+ * space.
+ *
+ * @param {name} a string indicating the name of the scene plot view.
+ * @param {start} 
+ * @param {width} width of the window object container
+ * @param {height} height of the window object container
+ * @param {idy} an *optional* integer representing the index where the object
+ * @param {countt} an *optional* Array of floats indicating the confidence
+ *             intervals in each dimension.
+ *
+ **/
+ScenePlotView3D = function( start, width, height, idy, countt ){
+
+//need to initialize the scene
+ this.scene = new THREE.Scene();
+
+  this.start = start === undefined ? 75 : start;
+  this.width = width === undefined ? 0 : width;
+  this.height = height === undefined ? 1 : height;
+  this.idy = idy === undefined ? 0.1 : idy;
+  this.countt = countt === undefined ? 1000 : countt;
+
+  /*
+  if (this.ci.length !== 0){
+    if (this.ci.length !== this.coordinates.length){
+      throw new Error("The number of confidence intervals doesn't match with"+
+                      " the number of dimensions in the coordinates "+
+                      "attribute. coords: " + this.coordinates.length +
+                      " ci: " + this.ci.length);
+    }
+  }*/
+
+  this.camera = new THREE.PerspectiveCamera( start, width / height, idy, countt );
+  this.renderer = new THREE.WebGLRenderer();
+  this.renderer.setSize( window.innerWidth, window.innerHeight );
+  //document.body.appendChild( renderer.domElement );
+
+  //camera, scene, ortho or perspective camera
+
+};
+
+ScenePlotView3D.prototype.setCamera = function( ){
+
+}