make_bootstrapped_tree.py
Description:
This script takes a tree and bootstrap support file and creates a pdf, colored by bootstrap support.
Usage: make_bootstrapped_tree.py [options]
Input Arguments:
Note
[REQUIRED]
- -m, --master_tree
This is the path to the master tree
- -s, --support
This is the path to the bootstrap support file
- -o, --output_file
This is the filename where the output should be written. If the suffix does not contain .pdf, then it will be attached
Output:
The result of this script is a pdf file.
Example:
In this example, the user supplies a tree file and a text file containing the jackknife support information, which results in a pdf file:
make_bootstrapped_tree.py -m master_tree.tre -s jackknife_support.txt -o jackknife_samples.pdf