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Error when running microhapdb marker mh06WL-017.v1 --format=detail.
Observed behavior
$ microhapdb marker mh06WL-017.v1 --format=detail
Traceback (most recent call last):
File "/Users/daniel.standage/anaconda3/envs/microhapdb/bin/microhapdb", line 33, in <module>
sys.exit(load_entry_point('microhapdb', 'console_scripts', 'microhapdb')())
File "/Users/daniel.standage/Software/MicroHapDB/microhapdb/cli/__init__.py", line 67, in main
mainmethod(args)
File "/Users/daniel.standage/Software/MicroHapDB/microhapdb/cli/marker.py", line 29, in main
display(
File "/Users/daniel.standage/Software/MicroHapDB/microhapdb/cli/marker.py", line 87, in display
print(marker.detail)
File "/Users/daniel.standage/Software/MicroHapDB/microhapdb/marker.py", line 238, in detail
self.print_detail_targetseq(output)
File "/Users/daniel.standage/Software/MicroHapDB/microhapdb/marker.py", line 294, in print_detail_targetseq
self.print_detail_targetseq_alleles(blocks, out) # Row 3+: alleles
File "/Users/daniel.standage/Software/MicroHapDB/microhapdb/marker.py", line 348, in print_detail_targetseq_alleles
allele=allelevars[n], length=self.variant_lengths[n]
IndexError: list index out of range
Expected behavior
A properly formatted marker detail report.
Technical specs
Which version of MicroHapDB are you using? (microhapdb --version): MicroHapDB v0.10+3.g62caacb.dirty
Which version of Python are you running? (python --version): Python 3.9.13
Which operating system (Windows, Mac, Linux) and version (Windows 10, Mac OS X Catalina, Ubuntu 18.04) are you running? MacOS Ventura 13.6
The text was updated successfully, but these errors were encountered:
Bug description
Error when running
microhapdb marker mh06WL-017.v1 --format=detail
.Observed behavior
Expected behavior
A properly formatted marker detail report.
Technical specs
microhapdb --version
): MicroHapDB v0.10+3.g62caacb.dirtypython --version
): Python 3.9.13The text was updated successfully, but these errors were encountered: