Formatting README

bioinfo-ut · Sep 22, 2017 · 3386b5a · 3386b5a
1 parent d6ecc55
commit 3386b5a
Show file tree

Hide file tree

Showing 2 changed files with 9 additions and 6 deletions.
diff --git a/README.FastGT.md b/README.FastGT.md
@@ -1,16 +1,17 @@
-# FastGT genotype caller
+# FastGT genotype caller package
 Copyright (C) University of Tartu 2015-2017  
+Please cite: Pajuste F-D, Kalpinski L, Möls M, Puurand T, Lepamets M, Remm M. (2017). FastGT: an alignment-free method for calling common SNVs directly from raw sequencing reads. Scientific Reports, 7:2537.    
 
 FastGT is a fast and accurate genotype caller from sequencing data.  
 It uses Empirical Bayes classifier for calling genotypes from the counts of polymorphism-specific k-mers.  
 FastGT can detect both canonical (diploid for autosomes and female X, haploid for male X and Y) and
 non-canonical (0-4 alleles) genotypes.  
 
 * Binaries  
-FastGT has two binaries - gmer_counter and gmer_caller. Pre-compiled binaries are in directory 'bin'.  
+FastGT has two binaries: gmer_counter and gmer_caller. Pre-compiled binaries are in directory 'bin'.  
 
 * Compilation  
-Change int src subdirectory and type:
+Change into subdirectory 'src' and type:
 ```
 make gmer_counter
 make gmer_caller

diff --git a/README.GenomeTester4.md b/README.GenomeTester4.md
@@ -1,5 +1,7 @@
 # GenomeTester4 package
-
+Copyright (C) University of Tartu 2015-2017  
+Please cite: Kaplinski L, Lepamets M, Remm M. (2015). GenomeTester4: a toolkit for performing basic set operations – union, intersection and complement on k-mer lists. GigaScience, 4:58.  
+
 GenomeTester4 is a toolkit for creating and manipulating k-mer lists. It
 contains 3 programs: glistmaker, glistcompare and glistquery. It is
 developed by Department of Bioinformatics, University of Tartu and
@@ -64,9 +66,9 @@ frequencies in the first list.
 
 GenomeTester4 is written in standard C. The only external dependency should
 be pthreads library that is standard in all Linux systems.  
-Binaries compiled with full optimization are included in directory "bin".  
+Binaries compiled with full optimization are included in directory 'bin'.  
 If you for whatever reason have to compile these manually, just enter into
-src subdirectory and type:  
+subdirectory 'src' and type:  
 ```
 make clean
 make