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Issue 338 enhanced kgx transform logging #365
Merged
sierra-moxon
merged 62 commits into
master
from
issue-338-enhanced-kgx-transform-logging
Jan 15, 2022
Merged
Issue 338 enhanced kgx transform logging #365
sierra-moxon
merged 62 commits into
master
from
issue-338-enhanced-kgx-transform-logging
Jan 15, 2022
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…) and applied to graph-summary classes
… to fix the static ValidationError methods now?)
… add singleton Validator; completely internalize error reporting inside the ErrorDetector class
…leases (won't test more ancient releases)
…o 'get_errors_catalog' (but only the old function... not the code using it)
…l dependency (should be updated by LinkML but...)
…porting; however, "flat" output is still a bit too verbose. Time to inject JSON hierarchy?
…ut, for use by 'validate' and 'graph-summary' KGX commands
…or tech debt repair
…sformer as 'owner' of Source and Sink instances, so as to provide access to global error logging inside those instances
…e log.info with "owner" Transformer log_error calls
… reporting feature; added optional 'level' argument to get_errors() and write_report() methods in ErrorDetecting class
…e.NO_CATEGORY' to MISSING_CATEGORY
sierra-moxon
approved these changes
Jan 15, 2022
SonarCloud Quality Gate failed. |
Thanks @sierra-moxon ! |
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Resolution of #338.
Application of KGX ErrorDetecting class to Transformer, Source and Sink classes, to provide more uniform error log reporting (similar to the validate and graph-summary modes).