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Add prefix: mavedb (#1046)
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Closes #1045

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Co-authored-by: cmungall <cmungall@users.noreply.github.com>
Co-authored-by: Charles Tapley Hoyt <cthoyt@gmail.com>
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3 people committed Feb 13, 2024
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41 changes: 41 additions & 0 deletions src/bioregistry/data/bioregistry.json
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},
"name": "MatrixDB Association"
},
"mavedb": {
"comment": "This is an interesting one as the full IDs as they appear on the page are of the form `urn:mavedb:00000011-a` suggesting this is the preferred URI expansion for identification purposes. However, mavedb hasn't been registered with IANA https://www.iana.org/assignments/urn-namespaces/urn-namespaces.xhtml",
"contact": {
"email": "alan.rubin@wehi.edu.au",
"github": "afrubin",
"name": "Alan Rubin",
"orcid": "0000-0003-1474-605X"
},
"contributor": {
"email": "cjmungall@lbl.gov",
"github": "cmungall",
"name": "Chris Mungall",
"orcid": "0000-0002-6601-2165"
},
"description": "Some IDs may represent experiment sets, e.g. https://www.mavedb.org/#/experiment-sets/urn:mavedb:00000011 Others represent genomic regions (specifically deep mutational scans thereof) e.g. https://www.mavedb.org/#/experiment-sets/urn:mavedb:00000011-a",
"example": "00000011-a",
"example_extras": [
"00000011"
],
"github_request_issue": 1045,
"homepage": "https://www.mavedb.org",
"name": "Multiplexed Assays of Variant Effect Database",
"pattern": "^\\S+$",
"publications": [
{
"doi": "10.1186/s13059-019-1845-6",
"pmc": "PMC6827219",
"pubmed": "31679514",
"title": "MaveDB: an open-source platform to distribute and interpret data from multiplexed assays of variant effect",
"year": 2019
}
],
"repository": "https://github.com/VariantEffect/mavedb-api",
"reviewer": {
"email": "cthoyt@gmail.com",
"github": "cthoyt",
"name": "Charles Tapley Hoyt",
"orcid": "0000-0003-4423-4370"
},
"uri_format": "https://www.mavedb.org/#/experiments/urn:mavedb:$1"
},
"maxo": {
"aberowl": {
"description": "The Medical Action Ontology (MAxO) provides a broad view of medical actions and includes terms for medical procedures, interventions, therapies, treatments, and recommendations.",
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