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Add prefix mavedb #1045

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cmungall opened this issue Feb 12, 2024 · 1 comment · Fixed by #1046
Closed

Add prefix mavedb #1045

cmungall opened this issue Feb 12, 2024 · 1 comment · Fixed by #1046
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New Used in combination with prefix, metaprefix, or collection for new entries Prefix

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@cmungall
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Prefix

mavedb

Name

Multiplexed Assays of Variant Effect Database

Homepage

https://www.mavedb.org

Source Code Repository

bioregistry

Description

Some IDs may represent experiment sets, e.g. https://www.mavedb.org/#/experiment-sets/urn:mavedb:00000011

Others represent genomic regions (specifically deep mutational scans thereof) e.g. https://www.mavedb.org/#/experiment-sets/urn:mavedb:00000011-a

License

No response

Publications

No response

Example Local Unique Identifier

00000011-a

Regular Expression Pattern for Local Unique Identifier

^\S+$

URI Format String

https://www.mavedb.org/#/experiments/urn:mavedb:$1

Wikidata Property

No response

Contributor Name

Chris Mungall

Contributor GitHub

cmungall

Contributor ORCiD

0000-0002-6601-2165

Contributor Email

cjmungall@lbl.gov

Contact Name

Alan Rubin

Contact ORCiD

No response

Contact GitHub

No response

Contact Email

alan.rubin@wehi.edu.au

Additional Comments

This is an interesting one as the full IDs as they appear on the page are of the form urn:mavedb:00000011-a suggesting this is the preferred URI expansion for identification purposes. However, mavedb hasn't been registered with IANA https://www.iana.org/assignments/urn-namespaces/urn-namespaces.xhtml

@cmungall cmungall added New Used in combination with prefix, metaprefix, or collection for new entries Prefix labels Feb 12, 2024
cthoyt added a commit that referenced this issue Feb 13, 2024
Closes #1045

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Co-authored-by: cmungall <cmungall@users.noreply.github.com>
Co-authored-by: Charles Tapley Hoyt <cthoyt@gmail.com>
@cthoyt
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cthoyt commented Feb 13, 2024

thanks @cmungall! I've added a bit more information in the PR and merged it.

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Labels
New Used in combination with prefix, metaprefix, or collection for new entries Prefix
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