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routine updates
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jchang committed Jun 6, 2000
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1 change: 1 addition & 0 deletions AUTHORS
@@ -1,4 +1,5 @@
Jeffrey Chang <jchang@smi.stanford.edu>
Brad Chapman <chapmanb@arches.uga.edu>
Andrew Dalke <dalke@acm.org>
Katharine Lindner <katel@worldpath.net>

17 changes: 11 additions & 6 deletions README
Expand Up @@ -20,8 +20,8 @@ System Requirements
-------------------

o Python 1.52 or above
o distutils

Some of the testing code will not work with DOS.


Installation
Expand All @@ -36,6 +36,10 @@ installed to the $PYTHONPATH environment variable. All the libraries
should be available under the 'Bio' package.


XXX to test
python br_regrtest.py




Contributing, Bug Reports
Expand All @@ -59,17 +63,16 @@ please report bugs to biopython@biopython.org.
Distribution Structure
----------------------

AUTHORS An (incomplete) list of people who have contributed.
Bio/ The python package that makes up biopython
Doc/ Documentation
Experimental/ Experimental code, not officially part of the distribution
LICENSE License information for this package
MANIFEST.in Tells distutils what files to distribute
NEWS Release notes and news
README This file
Scripts/ Miscellaneous, possibly useful, standalone scripts
Tests/ Regression testing code

The regression tests are currently all broken! We need to develop a
workable framework for doing this right.
setup.py



Expand All @@ -80,7 +83,7 @@ To Do

- Annotations on sequences
- BLAST additions
o fix Scanner and write Parser for NCBIWWW
o write Parser for NCBIWWW
o PSI-BLAST on WWW
- parsers
o Enzyme
Expand All @@ -96,6 +99,8 @@ To Do
- documentation(!!)
- look into Zope-ifying the web site
- deprecate Seq.py
- microarray data
- look into docstring browser

If you see something here you would like to work on, please let me
know!
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