adjusted minor format changes

biopython · Oct 22, 2005 · f68b609 · f68b609
1 parent 67e9eb2
commit f68b609
Showing 1 changed file with 21 additions and 21 deletions.
diff --git a/Tests/output/test_Nexus b/Tests/output/test_Nexus
@@ -195,36 +195,36 @@ usertype matrix_test stepmatrix=5
 ;
 
 ok
-Test Tree module. ... tree tree1 = ((t5,t1),(t7,(t6,(t8,t9,('t2 the name',('one should be punished, for (that)!','isn''that [a] strange name?'))))));
+Test Tree module. ... tree tree1 = (((((('one should be punished, for (that)!','isn''that [a] strange name?'),'t2 the name'),t8,t9),t6),t7),(t5,t1));
 Monophyletic t6,t7,t8,t9: -1
 Monophyletic t1,t5: 13
 Subtree t1,t5: Set(['t5', 't1'])
 The tree looks as follows:
-  #      taxon            prev            succ    brlen blen (sum)  support
-  1 'isn''that [a] strange name?'               2              []      0.0     106.84        -
-  2          -               4          [3, 1]    100.0     106.84     10.0
-  3 'one should be punished, for (that)!'               2              []      0.5     107.34        -
-  4          -               6          [5, 2]      0.4       6.84      0.3
-  5 't2 the name'               4              []      0.3       7.14        -
-  6          -               9       [7, 8, 4]      4.0       6.44      3.0
-  7         t8               6              []      1.2       7.64        -
-  8         t9               6        [17, 18]      3.4       9.84        -
-  9          -              11         [10, 6]      2.0       2.44      1.0
- 10         t6               9              []      1.0       3.44        -
- 11          -              16         [12, 9]     0.44       0.44     33.0
- 12         t7              11              []     99.9     100.34        -
- 13          -              16        [14, 15]     13.0       13.0     12.0
- 14         t5              13              []     99.0      112.0        -
- 15         t1              13              []     0.98      13.98        -
- 16          -            None        [13, 11]        -          -        -
- 17        t90               8              []      1.0      10.84        -
- 18        t91               8              []      1.0      10.84        -
+  #                            taxon            prev            succ    brlen blen (sum)  support
+  1    'isn''that [a] strange name?'               2              []    100.0     119.84     10.0
+  2                                -               4          [3, 1]      0.4      19.84      0.3
+  3 'one should be punished, for (that)!'               2              []      0.5      20.34        -
+  4                                -               6          [2, 5]      4.0      19.44      3.0
+  5                    't2 the name'               4              []      0.3      19.74        -
+  6                                -               9       [4, 7, 8]      2.0      15.44      1.0
+  7                               t8               6              []      1.2      16.64        -
+  8                               t9               6        [17, 18]      3.4      18.84        -
+  9                                -              11         [6, 10]     0.44      13.44     33.0
+ 10                               t6               9              []      1.0      14.44        -
+ 11                                -              16         [9, 12]     13.0       13.0     12.0
+ 12                               t7              11              []     99.9      112.9        -
+ 13                                -              16        [14, 15]      0.0        0.0      0.0
+ 14                               t5              13              []     99.0       99.0        -
+ 15                               t1              13              []     0.98       0.98        -
+ 16                                -            None        [11, 13]      0.0        0.0        -
+ 17                              t90               8              []      1.0      19.84        -
+ 18                              t91               8              []      1.0      19.84        -
 
 Root:  16
 self incompatibility...: []
 ok
 
 ----------------------------------------------------------------------
-Ran 2 tests in 0.158s
+Ran 2 tests in 0.163s
 
 OK