Moves states analysis into new folder

blab · Mar 4, 2021 · f9b3131 · f9b3131
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diff --git a/README.md b/README.md
@@ -23,7 +23,8 @@ been more important in shaping the course of the pandemic than changes in the vi
 * `data`: Contains TSV of data used for Ct and clinical analyses cleaned of patient identifiers.
 * `analyses`: Contains R markdown files with code for analyses and code to produce the cleaned dataset.
 * `scripts`: Contains python scripts used in assembling the dataset.
-* `figures`: Contains PDFs and JPGs of figures in the dataset.
+* `figures`: Contains PDFs and JPGs of figures generated from the analyses.
+* `additional-analyses`: Contains additional analyses not described in the manuscript.
 
 ## Citation
 

diff --git a/across-states/across-states.nb → ...l-analyses/across-states/across-states.nb b/across-states/across-states.nb → ...l-analyses/across-states/across-states.nb
diff --git a/across-states/covid_tracking_current.csv → .../across-states/covid_tracking_current.csv b/across-states/covid_tracking_current.csv → .../across-states/covid_tracking_current.csv
diff --git a/across-states/figures/proportion_vs_cfr.png → ...ross-states/figures/proportion_vs_cfr.png b/across-states/figures/proportion_vs_cfr.png → ...ross-states/figures/proportion_vs_cfr.png
diff --git a/across-states/strain_to_clade.tsv → ...nalyses/across-states/strain_to_clade.tsv b/across-states/strain_to_clade.tsv → ...nalyses/across-states/strain_to_clade.tsv
diff --git a/across-states/strain_to_state.tsv → ...nalyses/across-states/strain_to_state.tsv b/across-states/strain_to_state.tsv → ...nalyses/across-states/strain_to_state.tsv