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aa_muts.json
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aa_muts.json
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{
"annotations": {
"nuc": {
"start": 1,
"end": 10769,
"strand": 1
},
"CA": {
"start": 90,
"end": 456,
"strand": 1
},
"PRO": {
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"end": 735,
"strand": 1
},
"MP": {
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"end": 960,
"strand": 1
},
"ENV": {
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"end": 2472,
"strand": 1
},
"NS1": {
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"end": 3528,
"strand": 1
},
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"end": 4206,
"strand": 1
},
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"end": 4596,
"strand": 1
},
"NS3": {
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"end": 6447,
"strand": 1
},
"NS4A": {
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"end": 6828,
"strand": 1
},
"2K": {
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"end": 6897,
"strand": 1
},
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"end": 7650,
"strand": 1
},
"NS5": {
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"end": 10359,
"strand": 1
}
},
"nodes": {
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"aa_muts": {
"CA": [
"T108A"
],
"PRO": [],
"MP": [],
"ENV": [],
"NS1": [],
"NS2A": [
"S10C",
"L11S"
],
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}
},
"NODE_0000281": {
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}
},
"1_0015_PF": {
"aa_muts": {
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"PRO": [],
"MP": [],
"ENV": [],
"NS1": [
"L177S"
],
"NS2A": [
"A58V"
],
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}
},
"NODE_0000388": {
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}
},
"NODE_0000283": {
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}
},
"NODE_0000275": {
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}
},
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}
},
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}
},
"1_0181_PF": {
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}
},
"PF13/251013_18": {
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"MP": [
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],
"ENV": [],
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"K146E"
],
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}
},
"1_0134_PF": {
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],
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}
},
"1_0199_PF": {
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}
},
"1_0030_PF": {
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"ENV": [
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],
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}
},
"1_0111_PF": {
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"MP": [
"Q59K"
],
"ENV": [],
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}
},
"1_0038_PF": {
"aa_muts": {
"CA": [],
"PRO": [],
"MP": [],
"ENV": [
"T179A",
"I466T"
],
"NS1": [],
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"2K": [],
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}
},
"NODE_0000290": {
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"CA": [
"S109N"
],
"PRO": [],
"MP": [],
"ENV": [
"K419R"
],
"NS1": [
"R324Q"
],
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"NS5": [
"N624S",
"K670R"
]
}
},
"NODE_0000284": {
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}
},
"Z16006": {
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"NS1": [],
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}
},
"SZ01/2016/China": {
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"NS1": [],
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}
},
"SZ_WIV01": {
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}
},
"H/PF/2013": {
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}
},
"1_0087_PF": {
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}
},
"1_0035_PF": {
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"NS1": [],
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"NS2B": [
"A16V"
],
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}
},
"1_0080_PF": {
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}
},
"1_0049_PF": {
"aa_muts": {
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"PRO": [],
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"ENV": [],
"NS1": [],
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"2K": [],
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}
},
"1_0117_PF": {
"aa_muts": {
"CA": [],
"PRO": [],
"MP": [],
"ENV": [],
"NS1": [],
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"NS2B": [],
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"2K": [],
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}
},
"NODE_0000268": {
"aa_muts": {
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"ENV": [],
"NS1": [],
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"NS4A": [],
"2K": [],
"NS4B": [],
"NS5": [
"M114V"
]
}
},
"NODE_0000269": {
"aa_muts": {
"CA": [],
"PRO": [],
"MP": [],
"ENV": [],
"NS1": [
"Y122H"
],
"NS2A": [],
"NS2B": [],
"NS3": [
"H355Y"
],
"NS4A": [],
"2K": [],
"NS4B": [
"I26M"
],
"NS5": []
}
},
"NODE_0000267": {
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"CA": [],
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"ENV": [],
"NS1": [],
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"2K": [],
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}
},
"Haiti/1/2016": {
"aa_muts": {
"CA": [],
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"ENV": [],
"NS1": [],
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}
},
"NODE_0000270": {
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"2K": [],
"NS4B": [
"I176M"
],
"NS5": []
}
},
"Haiti/1225/2014": {
"aa_muts": {
"CA": [],
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"MP": [],
"ENV": [],
"NS1": [],
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}
},
"NODE_0000271": {
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"CA": [],
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"ENV": [
"V23I"
],
"NS1": [],
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"2K": [],
"NS4B": [],
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}
},
"Brazil/PE243/2015": {
"aa_muts": {
"CA": [],
"PRO": [],
"MP": [],
"ENV": [],
"NS1": [
"R99G"
],
"NS2A": [],
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"NS4A": [],
"2K": [],
"NS4B": [],
"NS5": []
}
},
"SPH2015": {
"aa_muts": {
"CA": [],
"PRO": [],
"MP": [],
"ENV": [],
"NS1": [],
"NS2A": [],
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"2K": [],
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}
},
"NODE_0000273": {
"aa_muts": {
"CA": [],
"PRO": [],
"MP": [],
"ENV": [
"Y59H"
],
"NS1": [
"F8L",
"E342G"
],
"NS2A": [],
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"NS3": [],
"NS4A": [],
"2K": [],
"NS4B": [
"E7G"
],
"NS5": [
"S26P",
"C36S",
"H110R",
"L386I"
]
}
},
"Brazil/2016/ZBRC14": {
"aa_muts": {
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"MP": [],
"ENV": [],
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}
},
"Brazil/2016/ZBRC25": {
"aa_muts": {
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"MP": [],
"ENV": [
"I23V"
],
"NS1": [],
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}
},
"NODE_0000165": {
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