A tumor-informed methylation based method to monitor minimal residual disease
please setup software by python-3.6 and R-3.6.3
run main.py like python3.6 main.py --tis_name MEDAL-115_TIS_Tumor,MEDAL-115_TIS_AdjN2 --pla_name MEDAL-115_PLA_A,MEDAL-115_PLA_B,MEDAL-115_PLA_C,MEDAL-115_PLA_F1,MEDAL-115_PLA_F2,MEDAL-115_PLA_F3 --methyl_file Methyl_data_example.txt --baseline_file baseline_normal_plasma.txt --output_dir /share/home/jincheng.qin/tmp/tim-mrd --r_home R-3.6.3
BNR