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hide prototyping tools in sv package #3556

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merged 1 commit into from Sep 8, 2017
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SHuang-Broad
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but still runnable if knowing their existence

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@tedsharpe tedsharpe left a comment

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Looks fine to me. I'm getting the Travis failure, too. Not your problem.

@SHuang-Broad SHuang-Broad merged commit 2c0d74e into master Sep 8, 2017
@SHuang-Broad SHuang-Broad deleted the sh_sv_hide_prototypes branch September 8, 2017 15:21
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Codecov Report

Merging #3556 into master will increase coverage by 0.008%.
The diff coverage is 5.882%.

@@               Coverage Diff               @@
##              master     #3556       +/-   ##
===============================================
+ Coverage     79.928%   79.935%   +0.008%     
  Complexity     17900     17900               
===============================================
  Files           1199      1199               
  Lines          65015     65015               
  Branches       10124     10124               
===============================================
+ Hits           51965     51970        +5     
+ Misses          9016      9012        -4     
+ Partials        4034      4033        -1
Impacted Files Coverage Δ Complexity Δ
...v/evidence/experimental/FindSmallIndelRegions.java 0% <ø> (ø) 0 <0> (ø) ⬇️
...iscoverFromLocalAssemblyContigAlignmentsSpark.java 0% <0%> (ø) 0 <0> (?)
...y/prototype/SimpleStrandSwitchVariantDetector.java 33.588% <0%> (ø) 13 <0> (ø) ⬇️
...ry/prototype/FilterLongReadAlignmentsSAMSpark.java 55.652% <16.667%> (ø) 29 <0> (?)
.../main/java/org/broadinstitute/hellbender/Main.java 54.857% <0%> (-1.143%) 28% <0%> (-1%)
...er/tools/spark/sv/discovery/AlignmentInterval.java 88.889% <0%> (+0.463%) 52% <0%> (+1%) ⬆️
...oadinstitute/hellbender/utils/gcs/BucketUtils.java 79.87% <0%> (+3.896%) 39% <0%> (ø) ⬇️

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3 participants