Adding arbitrary parameters to blastn_chunked_fasta function #46
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dpark01
requested changes
Apr 9, 2024
dpark01
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dpark01
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Apr 9, 2024
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extended the blastn_chunked_fasta to take arbitrary blastn options (like -task, -outfmt, -max_target_seqs) by introducing a new CLI entry point in taxon_filter, named chunk_blast_hits. This is essentially a wrapper of blastn_chunked_fasta and set ups the parameters to run BLASTN searches on the original query fasta file.