added pyyaml to docs dependencies (#682)

* added pyyaml to docs dependencies * mock out Bio.Seq
broadinstitute · Oct 2, 2017 · 3aa47b0 · 3aa47b0
1 parent bc78ec1
commit 3aa47b0
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diff --git a/docs/conf.py b/docs/conf.py
@@ -25,7 +25,7 @@
 import mock
 MOCK_MODULES = ['scipy', 'pysam', 'Bio', 'Bio.AlignIO', 'Bio.Alphabet',
                 'Bio.Alphabet.IUPAC', 'Bio.SeqIO', 'Bio.Data.IUPACData',
-		'pybedtools', 'pybedtools.BedTool']
+		        'Bio.Seq', 'pybedtools', 'pybedtools.BedTool']
 for mod_name in MOCK_MODULES:
     sys.modules[mod_name] = mock.Mock()
 

diff --git a/requirements-py-docs.txt b/requirements-py-docs.txt
@@ -2,3 +2,4 @@ Sphinx==1.4.4
 sphinx-argparse==0.1.15
 sphinx_rtd_theme==0.1.9
 matplotlib==1.5.3
+PyYAML==3.11