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CRAN rcheck and SAN warnings #43

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brodieG opened this issue Jul 7, 2017 · 3 comments
Closed

CRAN rcheck and SAN warnings #43

brodieG opened this issue Jul 7, 2017 · 3 comments

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@brodieG
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brodieG commented Jul 7, 2017

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@brodieG brodieG added this to the 0.1.1 milestone Jul 7, 2017
@brodieG brodieG added bug and removed enhancement labels Sep 12, 2017
@brodieG
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brodieG commented Sep 12, 2017

vagrant@vagrant:~/trunk/packages/lib/vetr/libs$ cat vetr.so.bcheck
ERROR: too many states (abstraction error?) in function RunGenCollect
ERROR: too many states (abstraction error?) in function tre_tnfa_run_parallel
ERROR: too many states (abstraction error?) in function ALIKEC_compare_attributes_internal
ERROR: too many states (abstraction error?) in function ALIKEC_compare_class
ERROR: too many states (abstraction error?) in function VALC_sub_symbol

Function ALIKEC_alike_rec
  [PB] has negative depth /home/vagrant/vetr-issue43a/src/alike.c:572
  [UP] attempt to unprotect more items (5) than protected (2), results will be incomplete /home/vagrant/vetr-issue43a/src/alike.c:572
  [PB] has possible protection stack imbalance /home/vagrant/vetr-issue43a/src/alike.c:573

Function ALIKEC_compare_attributes_internal
  [PB] has too high protection stack depth results will be incomplete
  [UP] protect stack is too deep, unprotecting all variables, results will be incomplete
  [PB] has an unsupported form of unprotect (not constant, not variable), results will be incomplete /home/vagrant/vetr-issue43a/src/attr.c:1198
  [UP] unsupported form of unprotect, unprotecting all variables, results will be incomplete /home/vagrant/vetr-issue43a/src/attr.c:1198

Function ALIKEC_compare_class
  [PB] has too high protection stack depth results will be incomplete
  [UP] protect stack is too deep, unprotecting all variables, results will be incomplete
  [PB] has negative depth /home/vagrant/vetr-issue43a/src/attr.c:255
  [UP] attempt to unprotect more items (5) than protected (1), results will be incomplete /home/vagrant/vetr-issue43a/src/attr.c:255
  [PB] has possible protection stack imbalance /home/vagrant/vetr-issue43a/src/attr.c:257

Function ALIKEC_compare_dimnames
  [PB] has possible protection stack imbalance /home/vagrant/vetr-issue43a/src/attr.c:744

Function VALC_all_bw
  [UP] unprotected variable lo_chr_sxp while calling allocating function Rf_asChar /home/vagrant/vetr-issue43a/src/all-bw.c:511
  [UP] unprotected variable hi_chr_sxp while calling allocating function Rf_ScalarInteger /home/vagrant/vetr-issue43a/src/all-bw.c:515
  [UP] unprotected variable lo_chr_sxp while calling allocating function Rf_ScalarInteger /home/vagrant/vetr-issue43a/src/all-bw.c:515
  [UP] unprotected variable hi_chr_sxp while calling allocating function Rf_allocVector /home/vagrant/vetr-issue43a/src/all-bw.c:518
  [UP] unprotected variable lo_chr_sxp while calling allocating function Rf_allocVector /home/vagrant/vetr-issue43a/src/all-bw.c:518

Function VALC_evaluate
  [PB] has an unsupported form of unprotect (not constant, not variable), results will be incomplete /home/vagrant/vetr-issue43a/src/eval.c:406
  [UP] unsupported form of unprotect, unprotecting all variables, results will be incomplete /home/vagrant/vetr-issue43a/src/eval.c:406

Function VALC_evaluate_recurse
  [PB] has possible protection stack imbalance /home/vagrant/vetr-issue43a/src/eval.c:185

Function VALC_sub_symbol
  [PB] has too high protection stack depth results will be incomplete
  [UP] protect stack is too deep, unprotecting all variables, results will be incomplete
  [PB] has an unsupported form of unprotect (not constant, not variable), results will be incomplete /home/vagrant/vetr-issue43a/src/parse.c:192
  [UP] unsupported form of unprotect, unprotecting all variables, results will be incomplete /home/vagrant/vetr-issue43a/src/parse.c:192
Analyzed 187 functions, traversed 2285667 states.

@brodieG
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brodieG commented Sep 13, 2017

down to:

ERROR: too many states (abstraction error?) in function RunGenCollect
ERROR: too many states (abstraction error?) in function tre_tnfa_run_parallel

Function ALIKEC_alike_rec
  [PB] has negative depth /home/vagrant/vetr-issue43a/src/alike.c:572
  [UP] attempt to unprotect more items (5) than protected (2), results will be incomplete /home/vagrant/vetr-issue43a/src/alike.c:572
  [PB] has possible protection stack imbalance /home/vagrant/vetr-issue43a/src/alike.c:573

Function VALC_evaluate
  [PB] has an unsupported form of unprotect (not constant, not variable), results will be incomplete /home/vagrant/vetr-issue43a/src/eval.c:406
  [UP] unsupported form of unprotect, unprotecting all variables, results will be incomplete /home/vagrant/vetr-issue43a/src/eval.c:406

Function VALC_evaluate_recurse
  [PB] has possible protection stack imbalance /home/vagrant/vetr-issue43a/src/eval.c:185
Analyzed 186 functions, traversed 43246 states.

@brodieG
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brodieG commented Sep 14, 2017

ERROR: too many states (abstraction error?) in function RunGenCollect
ERROR: too many states (abstraction error?) in function tre_tnfa_run_parallel

Function ALIKEC_alike_rec
  [PB] has possible protection stack imbalance /home/vagrant/vetr-issue43a/src/alike.c:567
Analyzed 186 functions, traversed 43241 states.

brodieG added a commit that referenced this issue Sep 17, 2017
Fix #81, Fix #77, Fix #76, Fix #73, Fix #70,
Fix #69, Fix #65, Fix #64, Fix #61, Fix #59
Fix #56, Fix #51, Fix #48, Fix #47, Fix #46,
Fix #45, Fix #43
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