Is there documentation for bx-python outside the codebase?

[alexlenail]

the wiki page redirects to the repo main page which is weird...

[dylanmmarshall]

I too, would like it if there was further documentation...

[dylanmmarshall]

I noticed there was an initial attempt at sphinx documentation https://github.com/bxlab/bx-python/tree/master/doc/source/static but wasn't followed up on.

[alexlenail]

@DylanM-Marshall if you're in the genomics space, fastinterval depends on this and has better docs. http://fastinterval.readthedocs.io/en/latest/

[dylanmmarshall]

That's awesome and all, but my files are primarily bigwig, not fasta - even if conversion between the two is relatively simple.

[jxtx]

We can rig up readthedocs to generate what is there. But more should be written.

…

On Wed, Feb 22, 2017 at 6:25 PM Dylan ***@***.***> wrote: That's awesome and all, but my files are primarily bigwig, not fasta - even if conversion between the two is relatively simple. — You are receiving this because you are subscribed to this thread. Reply to this email directly, view it on GitHub <#16 (comment)>, or mute the thread <https://github.com/notifications/unsubscribe-auth/AAE4Za9q4IOocsmoRijlve_qZ9cuqrzYks5rfMP4gaJpZM4L0Dvu> .

[dylanmmarshall]

@jxtx That would be super cool

[jxtx]

http://bx-python.readthedocs.io/en/latest/

(it's a start)

[dylanmmarshall]

Great things have small beginnings!

[jxtx]

Okay, now we are getting somewhere. Docs should be building for all modules including Cython ones. Now just need to fill in some of those doc strings.

http://bx-python.readthedocs.io/en/latest/lib/bx.bbi.bigwig_file.html