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Gene panel column data in patient view download #2741

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merged 1 commit into from
Dec 2, 2019

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ngocnn1104
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@ngocnn1104 ngocnn1104 commented Sep 30, 2019

What? Why?

Implementation of feature: Gene panel column data in patient view download

Code changes

  • Created PanelColumnFormatter.tsx to render the related panel data
  • Added Gene panel column (hidden by default) to PatientViewMutationTable.tsx and CopyNumberTableWrapper.tsx

GIF

Peek 2019-09-30 15-41

Remarks:

  • end-to-end-tests are failing because BACKEND_BRANCH is pointing to patientview_genepanel_api_integration which does not exist

@pvannierop pvannierop self-assigned this Sep 30, 2019
@pvannierop pvannierop added hyve RFC45 PatientView: gene panel integration labels Sep 30, 2019
@ngocnn1104 ngocnn1104 changed the base branch from patientview_genepanel_api_integration to patientview_filter_genome_overview October 15, 2019 10:25
}

render() {
const { data, sampleToMutationGenePanelId } = this.props;
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seems like there's some indentation issues here. you can run prettier.js on this file. see command in scripts of package.json

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alisman commented Oct 15, 2019

@ngocnn1104 @pvannierop can you guys explain what branch this is PR is targetting?
Great job with tests and screenshot btw!

@ngocnn1104 ngocnn1104 force-pushed the gene_panel_download branch 3 times, most recently from 930deb8 to 4843f14 Compare October 16, 2019 13:41
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@ngocnn1104 @pvannierop can you guys explain what branch this is PR is targetting?
Great job with tests and screenshot btw!

Hi @alisman, we will target the master branch eventually, but now some features relating to gene panel is still in development and they are dependent on one another. I added the DO NOT MERGE label to this PR for now. We will keep this in mind for future PRs. Thanks.

@ngocnn1104 ngocnn1104 force-pushed the gene_panel_download branch 3 times, most recently from ed8b8d6 to 4581762 Compare October 22, 2019 12:43
@jjgao jjgao temporarily deployed to cbioportal-f-gene-panel-255bqe October 23, 2019 18:58 Inactive
@pvannierop pvannierop force-pushed the patientview_filter_genome_overview branch from a850e35 to 9810e74 Compare October 24, 2019 07:14
@jjgao jjgao temporarily deployed to cbioportal-f-gene-panel-255bqe October 24, 2019 07:15 Inactive
@ngocnn1104 ngocnn1104 changed the base branch from patientview_filter_genome_overview to master December 2, 2019 09:23
@alisman alisman merged commit bd13840 into cBioPortal:master Dec 2, 2019
@alisman alisman deleted the gene_panel_download branch December 2, 2019 15:18
@inodb inodb added the feature label Dec 6, 2019
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feature hyve RFC45 PatientView: gene panel integration
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