v2.1.1 - Tabix query update

2.1.1

• Update tabix->query to use tabix->query_full

v2.1.0 - test fixes

Fixes an issue in tests only evident in later perl versions

v2.0.0 - legacy software cleanup

• Upgraded to use Bio::DB::HTS for fai and Tabix perl bindings.
• Relies on cgpVcf/VAGrENT to install Bio::DB::HTS and associated tools.

Considered major release as tools previously installed have changed which may downstream dependancies.

v1.1.6 - Tests fixed for perl-5.18+

Bad test design corrected.

v1.1.3 - Empty but header bedpe bugfix

v.1.1.3

Dealing with empty but headered bedpe files

v1.1.2 - Deals with empty files because of no results

• Added check for file with only header indicating no results.

v1.1.1 - error text correction

Fixes confusing text in install code

v1.1.0 - Corrections for file parsing

Corrections are specific to parsing of files generated by BrassI. Previously not used in BRASS workflow.

v1.0.1 - Stable release

This is the first release fully tested in a non-sanger environment (AWS image).

v1.0.0 - prelim release from dev branch

For PanCancer testing