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Cancer IT

Bioinformatic support for Cancer, Ageing and Somatic Mutation group at the Wellcome Trust Sanger Institute

Pinned repositories

  1. Somatic copy number analysis using paired end wholegenome sequencing

    Perl 33 9

  2. Breakpoints via assembly - Identifies breaks and attempts to assemble rearrangements.

    Perl 26 11

  3. Cancer Genome Project Insertion/Deletion detection pipeline based around Pindel

    Perl 14 6

  4. Reference implementation of CGP workflow for CaVEMan SNV analysis

    Perl 2 1

  5. JBrowse plugin to display multiple BigWig tracks as a stacked proportion

    JavaScript 4 1

  6. A toolset for comparing genomic variants to reference genome annotation to identify potential biological consequences

    Perl 5 3

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