GitHub - cancersysbio/TRIOB07: These are the processed data files related to the bulk expression data from breast tumors treated on the TRIO B07 trial (NCT00769470). Tumor or tumor bed tissue was collected and subjected to the Agilent Whole Human Genome 44K 2-color chip pre-treatment, on-treatment (after 1 cycle of HER2-targeted therapy alone, either trastuzumab, lapatinib, or the combination), and post-treatment (at definitive surgery after 6 cycles of docetaxel/carboplatin in combination with assigned HER2-targeted therapy). The raw data is available at GEO (GSE130788). The folder also includes the full protocol for the TRIO B07 trial and the gene sets assessed.

cancersysbio / TRIOB07 Public

These are the processed data files related to the bulk expression data from breast tumors treated on the TRIO B07 trial (NCT00769470). Tumor or tumor bed tissue was collected and subjected to the Agilent Whole Human Genome 44K 2-color chip pre-treatment, on-treatment (after 1 cycle of HER2-targeted therapy alone, either trastuzumab, lapatinib, o…

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Name		Name	Last commit message	Last commit date
Latest commit History 7 Commits
GSEA.txt		GSEA.txt
Gene_Signatures.gmt.txt		Gene_Signatures.gmt.txt
Histopathology.txt		Histopathology.txt
TRIO TORI B07 Amendment#3 3-19-13.pdf		TRIO TORI B07 Amendment#3 3-19-13.pdf
onTreatment.txt		onTreatment.txt
postTreatment.txt		postTreatment.txt
preTreatment.txt		preTreatment.txt