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morungos edited this page Sep 11, 2014
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CaPSID (Computational Pathogen Sequence IDentification) is a comprehensive open source platform which integrates a high-performance computational pipeline for pathogen sequence identification and characterization in human genomes and transcriptomes together with a scalable results database and a user-friendly web-based software application for managing, querying and visualizing results.
- Home
- Dependencies
- Read these first
- Quick Setup
- Installation
- Tutorial
- Documentation
- Aligning RNA seq data
- CaPSID's utils howto
- User Permissions
- Creating a Configuration File
- Pipeline Examples
- Release Notes