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promor 0.2.1

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@caranathunge caranathunge released this 21 Jul 14:37

promor 0.2.1

Documentation updates

  • In previous versions, the functionality of the uniq_pep parameter
    (see create_df help page) was incorrectly described. We corrected the
    description to match its functionality as follows: "Numerical. Proteins that are
    identified by this number or fewer number of unique peptides are filtered out
    (default is 2).Only applies when input_type = "MaxQuant".

Bug fixes

  • In previous versions, volcano_plot function plotted "-log10(P-value)" on
    the y-axis by default even when sig = "adjP" and only colored the dots by
    their significance based on "adjP". In this version, sig = "adjP" shows
    "-log10.adj. P-value" on the y-axis and colors the dots by their "adjP"
    significance.