This project has been funded by SFB 1158 (https://www.sfb1158.de/ , Project identifier (German Research Foundation (DFG) - project number 255156212)
Metadata standardization GUI. Makes it easy to edit metadata related to neurophysiological experiments.
It is recommended that you install heidelberg-metadata-gui
in a clean environment, for example with conda:
$ conda create -n env_heidelberg python=3.7 pip
In your clean environment, just pip install:
$ pip install heidelberg-metadata-gui
To install from the repository:
$ pip install git+https://github.com/catalystneuro/heidelberg-metadata-gui
Navigate to the directory where your dataset is stored, then run from command line:
$ metadata-gui
On your browser, navigate to localhost:5000
.
You can run metadata-gui with optional arguments, for example, to start it with a specific schema file and run the server on a specific port:
$ metadata-gui --schema_path /home/user/my_schema.json --port XXXX
- Build docker with:
docker build -t heidelberg:latest .
- run the docker with (this will reference a local folder to docker):
docker run -it -p 5000:5000 -v /host/path/to/filesFolder:/usr/src/heidelberg_metadata_gui/files <image_id>
Your referenced local folder will be in the files folder of the docker