Use archive deb repos

.circleci/config.yml

@@ -34,8 +34,8 @@ jobs:
             set -x
             ## Modified
             ## rsync -avz -e "ssh -o StrictHostKeyChecking=no -o UserKnownHostsFile=/dev/null" ~/publish/sandbox/test-results/index.html ec2-user@tcoffee.org:~/Dropbox/Public/public_html/Packages/tests/test-results-linux-x64-$(date +"%Y-%m-%d-%H:%M").html
-            ## TODO seems like the path ~/publish/sandbox/test-results/index.html does not exists and give exception from 20220522
-            # aws s3 cp ~/publish/sandbox/test-results/index.html s3://tcoffee-packages/tests/test-results-linux-x64-$(date +"%Y-%m-%d-%H:%M").html
+            ## TODO seems like the path ~/publish/sandbox/test-results/index.html does not exists
+            aws s3 cp ~/publish/sandbox/test-results/index.html s3://tcoffee-packages/tests/test-results-linux-x64-$(date +"%Y-%m-%d-%H:%M").html
             [[ "$test_status" != 0 ]] && exit $test_status || true
             )
           no_output_timeout: 30m

docker/Dockerfile

@@ -1,7 +1,7 @@
 FROM debian:stretch
 MAINTAINER Paolo Di Tommaso <paolo.ditommaso@gmail.com>
 
-RUN  sed -i 's/security.debian.org\/debian-security/cdn-aws.deb.debian.org\/debian-security/g' /etc/apt/sources.list && \
+RUN echo "deb http://archive.debian.org/debian stretch main" > /etc/apt/sources.list && \
   apt-get update --fix-missing && \
   apt-get install -q -y bc vim procps ghostscript unzip curl wget && \
   apt-get install -q -y perl-modules libnet-ssleay-perl libcrypt-ssleay-perl libssl-dev libexpat1 libexpat1-dev liblwp-protocol-https-perl && \
@@ -21,7 +21,7 @@ RUN curl -s ftp://ftp.ncbi.nlm.nih.gov/blast/executables/blast+/2.2.28/ncbi-blas
 #
 # Add T-Coffee
 # 
-ADD tcoffee /opt/tcoffee
+# ADD tcoffee /opt/tcoffee
 
 #
 # Environment