doc update

cbcrg · Aug 5, 2015 · 589f65d · 589f65d
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diff --git a/docs/formats.rst b/docs/formats.rst
diff --git a/docs/index.rst b/docs/index.rst
@@ -11,10 +11,11 @@ Contents:
 .. toctree::
    :maxdepth: 2
 
-   t_coffee_technical
+   quickstart
    t_coffee_tutorial
-   TCS
-   3DTREE
+   trees
+   t_coffee_technical
+   release_notes
    problems
    developer
 

diff --git a/docs/installation.rst b/docs/installation.rst
diff --git a/docs/manual.rst b/docs/manual.rst
diff --git a/docs/msa_evaluation.rst b/docs/msa_evaluation.rst