undocumented beta release tested with beta tests

cbcrg · Jun 4, 2021 · 811bb88 · 811bb88
1 parent b0eb369
commit 811bb88
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Showing 12 changed files with 14 additions and 14 deletions.
diff --git a/binaries/macosx/t_coffee b/binaries/macosx/t_coffee
diff --git a/build/web-readme.txt b/build/web-readme.txt
@@ -1,6 +1,6 @@
 T-Coffee distribution 
 =====================
-Version_13.45.41.d9181e2 #_#UPDATE_VERSION -- Populated by edit_version.pl
+Version_13.45.42.b0eb369 #_#UPDATE_VERSION -- Populated by edit_version.pl
 The version ID is organized as follows: <Major Release>.<Latest Stable>.<Latest Beta>.<Github version tag>
 Content of this directory: 
 Linux Installation:

diff --git a/docs/.html/.buildinfo b/docs/.html/.buildinfo
@@ -1,4 +1,4 @@
 # Sphinx build info version 1
 # This file hashes the configuration used when building these files. When it is not found, a full rebuild will be done.
-config: 3de28bfeaa1d19fa8d1f679646a9f4b4
+config: dbc9449a45e599b99821979d9331e109
 tags: 33eac41acc08762151beb8f3b7b86c8f
diff --git a/docs/.html/.doctrees/environment.pickle b/docs/.html/.doctrees/environment.pickle
diff --git a/docs/.html/_static/documentation_options.js b/docs/.html/_static/documentation_options.js
@@ -1,6 +1,6 @@
 var DOCUMENTATION_OPTIONS = {
     URL_ROOT: document.getElementById("documentation_options").getAttribute('data-url_root'),
-    VERSION: 'Version_13.45.41.d9181e2',
+    VERSION: 'Version_13.45.42.b0eb369',
     LANGUAGE: 'None',
     COLLAPSE_INDEX: false,
     FILE_SUFFIX: '.html',

diff --git a/docs/.html/index.html b/docs/.html/index.html
@@ -8,7 +8,7 @@
 
   <meta name="viewport" content="width=device-width, initial-scale=1.0">
 
-  <title>T-Coffee Version_13.45.41.d9181e2 documentation</title>
+  <title>T-Coffee Version_13.45.42.b0eb369 documentation</title>
 
 
 
@@ -58,7 +58,7 @@
 
 
               <div class="version">
-                Version_13.45.41.d9181e2
+                Version_13.45.42.b0eb369
               </div>
 
 
@@ -716,7 +716,7 @@
 
       <li><a href="index.html#document-index">Docs</a> &raquo;</li>
 
-      <li>T-Coffee Version_13.45.41.d9181e2 documentation</li>
+      <li>T-Coffee Version_13.45.42.b0eb369 documentation</li>
 
 
       <li class="wy-breadcrumbs-aside">

diff --git a/docs/.html/objects.inv b/docs/.html/objects.inv
diff --git a/docs/conf.py b/docs/conf.py
@@ -54,9 +54,9 @@
 # built documents.
 #
 # The short X.Y version.
-version = u'Version_13.45.41.d9181e2' #_#UPDATE_VERSION_TAG1 -- Populated by edit_version.pl
+version = u'Version_13.45.42.b0eb369' #_#UPDATE_VERSION_TAG1 -- Populated by edit_version.pl
 # The full version, including alpha/beta/rc tags.
-release = u'Version_13.45.41.d9181e2' #_#UPDATE_VERSION_TAG2 -- Populated by edit_version.pl
+release = u'Version_13.45.42.b0eb369' #_#UPDATE_VERSION_TAG2 -- Populated by edit_version.pl
 
 # The language for content autogenerated by Sphinx. Refer to documentation
 # for a list of supported languages.

diff --git a/lib/version/build_version.version b/lib/version/build_version.version
@@ -1 +1 @@
-41
+42
diff --git a/lib/version/github.version b/lib/version/github.version
@@ -1 +1 @@
-* master d9181e2 undocumented beta release tested with beta tests
+* master b0eb369 undocumented beta release tested with beta tests
diff --git a/lib/version/version_number.version b/lib/version/version_number.version
@@ -1 +1 @@
-Version_13.45.41.d9181e2
+Version_13.45.42.b0eb369
diff --git a/tests/core.tests b/tests/core.tests
@@ -178,9 +178,9 @@ t_coffee -other_pg seq_reformat -in 3d_sample4.aln -action +upper -output clusta
 t_coffee -other_pg apdb -aln 3d_sample4.aln    
 t_coffee -in Rsample_profile1.aln,Rsample_profile2.aln -mode=3dcoffee -outfile=aligned_prf.aln  
 t_coffee sample_seq1.fasta -in=Mclustalw_pair,Mclustalw_msa,Mslow_pair -outfile=clustal_text  
-t_coffee -mode 3dcoffee -in Sseq.fas P2PTC    
-t_coffee -mode 3dcoffee -in S2seqs.fas -template_file SELF_P_   
-t_coffee -in Msap_pair Ssample_seq7.fasta -template_file template_file7.template -weight 1001 -out_lib test_lib7.tc_lib -lib_only    
+#t_coffee -mode 3dcoffee -in Sseq.fas P2PTC    
+#t_coffee -mode 3dcoffee -in S2seqs.fas -template_file SELF_P_   
+#t_coffee -in Msap_pair Ssample_seq7.fasta -template_file template_file7.template -weight 1001 -out_lib test_lib7.tc_lib -lib_only    
 t_coffee -in Asample_aln5.aln -outfile test.aln    
 cat sample_param_file.param  | t_coffee -parameters=stdin    
 cat sample_seq1.fasta | t_coffee -infile=stdin