Description: Two scripts to process pdb files through CRYSON and obtain a list of Rg and Dmax values.
The example here uses the 2KKJ.pdb file split into its 10 conformers.
Original pdb available from: https://www.rcsb.org/structure/2kkj
Requires CRYSON program within ATSAS tools (free, registration required).
Available from: https://www.embl-hamburg.de/biosaxs/cryson.html
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cryson_batch.py
Process a batch of pdb files through the CRYSON program to calculate small-angle neutron scattering (SANS) curves. -
parse_Rg_Dmax.py
Parse out Rg and Dmax values from CRYSON *.log files and write to file.