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plotVCF dependencies

Enrico Cocchi edited this page Dec 7, 2022 · 1 revision

plotVCF requires some other R packages in order to run, you can take a look at DESCRIPTION Imports and Depends section if you want to have an updated view of dependencies.

As example, at the time of writing:

Imports:
  tidyverse (>= 1.3.2),
  GenomicFeatures (>= 1.48.4),
  Biostrings (>= 2.64.1),
  ggbio (>= 1.44.1),
Depends:
    VariantAnnotation (>= 1.42.1),
    dplyr,
    R (>= 2.10)

but we do not exclude that this list will grow up in the future.

As explained in plotVCF Installation page, R will check that your library contains those packages with the specified versions and, in case it does not, they will be installed with plotVCF installation

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