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116 Open 494 Closed
116 Open 494 Closed
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Issues list

open_soma error: The bucket you are attempting to access must be addressed using the specified endpoint. bug Something isn't working
#1285 opened Sep 20, 2024 by ybukhman
feature_dataset_presence_matrix should include genes with 0 counts bug Something isn't working
#1284 opened Sep 20, 2024 by ebezzi
Bug with get_all_available_embeddings bug Something isn't working
#1283 opened Sep 20, 2024 by huguesva
1
differential expression - memento user request
#1282 opened Sep 17, 2024 by MatthiasBeyens
Identical values reported for "var.nnz" and "var.n_measured_obs" for different datasets retrieved via get_anndata() bug Something isn't working
#1281 opened Sep 16, 2024 by khughitt
[R] Remove tiledb dependency for R package r api tech
#1274 opened Sep 5, 2024 by ivirshup
2 tasks
1
Adding a dataset of tissue_type = "organoid" to Census scVI embedding P1 Priority 1 - Improvement with wide impact, fix within 1 week user request
#1271 opened Sep 4, 2024 by kavithakrishna1
Network Issue FAQs documentation Improvements or additions to documentation network P1 Priority 1 - Improvement with wide impact, fix within 1 week
#1265 opened Aug 19, 2024 by cathystoli
@ivirshup
1
Stop blocking Boroni collection bug Something isn't working data Related to the data in census dp Data Platform P0 Priority 0 - Critical, fix ASAP!
#1263 opened Aug 15, 2024 by ivirshup
2 of 3 tasks
@ivirshup
[R] cellxgene-census PermanentRedirect S3 error bug Something isn't working upstream
#1261 opened Aug 14, 2024 by JHYSiu
9
Current stable data release has fewer cancer cells than "2023-05-15" data Related to the data in census
#1255 opened Jul 31, 2024 by YubinXie
11
tools/census_contrib/pyproject.toml is super out of date bug Something isn't working P2 Priority 2 - Improvement with narrower impact, fix within a month
#1254 opened Jul 30, 2024 by ivirshup
@ivirshup
TimeoutError with cellxgene_census.get_anndata() needs clarification network
#1253 opened Jul 30, 2024 by LysSanzMoreta
7
Add function for listing available h5ads for download Priority backlog items python api Related to the API r api user request
#1251 opened Jul 24, 2024 by ivirshup
3
[misc] user-agent tagging in R analytics Work relating to analytics support r api
#1249 opened Jul 22, 2024 by pablo-gar
4 tasks
Bump tiledbsoma version on builder to 1.12.3 blocked Issue cannot be completed due to an external dependency. effort-s P0 Priority 0 - Critical, fix ASAP!
#1243 opened Jul 12, 2024 by ivirshup
@ivirshup
11
Execution Time for highly_variable_genes Function performance
#1242 opened Jul 12, 2024 by ckrilow
2
Support numpy 2 user request
#1240 opened Jul 12, 2024 by ivirshup
Add live Census tests for PyTorch loaders P1 Priority 1 - Improvement with wide impact, fix within 1 week pytorch tileDB work
#1222 opened Jul 3, 2024 by ebezzi
[pytorch] Add encoders for X P0 Priority 0 - Critical, fix ASAP! pytorch tileDB work user request
#1219 opened Jul 1, 2024 by ebezzi
1
embeddings functions do not support same values for organisms as main API bug Something isn't working effort-xs P2 Priority 2 - Improvement with narrower impact, fix within a month
#1205 opened Jun 24, 2024 by ivirshup
ExperimentDataPipe should record the iterated joinids P1 Priority 1 - Improvement with wide impact, fix within 1 week pytorch tileDB work
#1182 opened Jun 4, 2024 by ebezzi
Do not hardcode bucket names in the Census codebase P0 Priority 0 - Critical, fix ASAP! Priority backlog items python api Related to the API
#1181 opened Jun 4, 2024 by ebezzi
@ebezzi
1
Incorrect size of result when passing obs_coords discussion python api Related to the API
#1157 opened May 22, 2024 by ivirshup
4
Add dev dependencies to pyproject.toml effort-xxs python api Related to the API tech
#1148 opened May 17, 2024 by ivirshup
5 tasks
ProTip! What’s not been updated in a month: updated:<2024-08-20.