/
pom.xml
182 lines (174 loc) · 7.8 KB
/
pom.xml
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<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
<modelVersion>4.0.0</modelVersion>
<artifactId>jannovar-hgvs</artifactId>
<packaging>jar</packaging>
<name>${project.groupId}:${project.artifactId}</name>
<description>parsing and representing HGVS annotations</description>
<url>http://charite.github.io/jannovar/</url>
<parent>
<groupId>de.charite.compbio</groupId>
<artifactId>Jannovar</artifactId>
<version>0.42-SNAPSHOT</version>
</parent>
<properties>
<project.build.sourceEncoding>UTF-8</project.build.sourceEncoding>
<antlr4.visitor>false</antlr4.visitor>
<antlr4.listener>true</antlr4.listener>
</properties>
<dependencies>
<dependency>
<groupId>com.google.guava</groupId>
<artifactId>guava</artifactId>
<version>${guava.version}</version>
</dependency>
<!-- Antlr4 runtime -->
<dependency>
<groupId>org.antlr</groupId>
<artifactId>antlr4-runtime</artifactId>
<version>${antlr.version}</version>
</dependency>
</dependencies>
<build>
<resources>
<resource>
<directory>src/main/resources</directory>
<!--Use filtering so that maven will replace placeholders
with values from the pom e.g. ${project.version} -->
<filtering>true</filtering>
</resource>
</resources>
<plugins>
<!-- Helps finding generated sources from Antlr4 -->
<plugin>
<groupId>org.codehaus.mojo</groupId>
<artifactId>build-helper-maven-plugin</artifactId>
<version>3.5.0</version>
<executions>
<execution>
<id>add-source</id>
<phase>generate-sources</phase>
<goals>
<goal>add-source</goal>
</goals>
<configuration>
<sources>
<source>${project.build.directory}/generated-sources/antlr4/</source>
</sources>
</configuration>
</execution>
</executions>
</plugin>
<!-- Antlr4 generator -->
<plugin>
<groupId>org.antlr</groupId>
<artifactId>antlr4-maven-plugin</artifactId>
<version>${antlr4-maven-plugin.version}</version>
<executions>
<execution>
<goals>
<goal>antlr4</goal>
</goals>
</execution>
</executions>
</plugin>
<!-- Specify the dependencies to copy -->
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-dependency-plugin</artifactId>
<version>3.6.1</version>
<executions>
<execution>
<id>copy-dependencies</id>
<phase>package</phase>
<goals>
<goal>copy-dependencies</goal>
</goals>
<configuration>
<outputDirectory>${project.build.directory}/lib</outputDirectory>
<overWriteReleases>false</overWriteReleases>
<overWriteSnapshots>false</overWriteSnapshots>
<overWriteIfNewer>true</overWriteIfNewer>
</configuration>
</execution>
</executions>
</plugin>
<!-- Specify the resources which need to be made accessible to
the user -->
<plugin>
<artifactId>maven-resources-plugin</artifactId>
<version>3.3.1</version>
<executions>
<execution>
<id>copy-resources</id>
<phase>validate</phase>
<goals>
<goal>copy-resources</goal>
</goals>
<configuration>
<outputDirectory>${project.build.directory}/resources</outputDirectory>
<resources>
<resource>
<directory>src/main/resources</directory>
<!--Use filtering so that maven will
replace placeholders with values from the pom e.g. ${project.version} -->
<filtering>true</filtering>
<includes>
<include>application.properties</include>
<include>example.settings</include>
<include>test.settings</include>
<include>log4j2.xml</include>
</includes>
</resource>
</resources>
</configuration>
</execution>
</executions>
</plugin>
</plugins>
</build>
<profiles>
<!-- Ignore various plugins in Eclipse -->
<profile>
<id>only-eclipse</id>
<activation>
<property>
<name>m2e.version</name>
</property>
</activation>
<build>
<pluginManagement>
<plugins>
<!--This plugin's configuration is used to store
Eclipse m2e settings only. It has no influence on the Maven build itself. -->
<plugin>
<groupId>org.eclipse.m2e</groupId>
<artifactId>lifecycle-mapping</artifactId>
<version>1.0.0</version>
<configuration>
<lifecycleMappingMetadata>
<pluginExecutions>
<pluginExecution>
<pluginExecutionFilter>
<groupId>org.antlr</groupId>
<artifactId>antlr4-maven-plugin</artifactId>
<versionRange>[4.0,)</versionRange>
<goals>
<goal>antlr4</goal>
</goals>
</pluginExecutionFilter>
<action>
<execute>
<runOnIncremental>true</runOnIncremental>
</execute>
</action>
</pluginExecution>
</pluginExecutions>
</lifecycleMappingMetadata>
</configuration>
</plugin>
</plugins>
</pluginManagement>
</build>
</profile>
</profiles>
</project>