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Hello, I am trying to run snpgenie_wthin_group.pl after installing Parallel::ForkManager (with -force option) and get the error message: MacBookPro:SNPGenie-master julia$ perl snpgenie_within_group.pl --fasta_file_name=compl_cons_ORF --gtf_file_name=GGS.gtf Can't locate Parallel/ForkManager.pm in @INC (@INC contains: /Library/Perl/5.16/darwin-thread-multi-2level /Library/Perl/5.16 /Network/Library/Perl/5.16/darwin-thread-multi-2level /Network/Library/Perl/5.16 /Library/Perl/Updates/5.16.2/darwin-thread-multi-2level /Library/Perl/Updates/5.16.2 /System/Library/Perl/5.16/darwin-thread-multi-2level /System/Library/Perl/5.16 /System/Library/Perl/Extras/5.16/darwin-thread-multi-2level /System/Library/Perl/Extras/5.16 .) at snpgenie_within_group.pl line 62. BEGIN failed--compilation aborted at snpgenie_within_group.pl line 62. Do you have any idea what I can do to fix it? Thanks!!! #26

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jhillung opened this issue Jan 9, 2020 · 3 comments

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@jhillung
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jhillung commented Jan 9, 2020

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@jhillung jhillung changed the title Hello, Hello, I am trying to run snpgenie_wthin_group.pl after installing Parallel::ForkManager (with -force option) and get the error message: MacBookPro:SNPGenie-master julia$ perl snpgenie_within_group.pl --fasta_file_name=compl_cons_ORF --gtf_file_name=GGS.gtf Can't locate Parallel/ForkManager.pm in @INC (@INC contains: /Library/Perl/5.16/darwin-thread-multi-2level /Library/Perl/5.16 /Network/Library/Perl/5.16/darwin-thread-multi-2level /Network/Library/Perl/5.16 /Library/Perl/Updates/5.16.2/darwin-thread-multi-2level /Library/Perl/Updates/5.16.2 /System/Library/Perl/5.16/darwin-thread-multi-2level /System/Library/Perl/5.16 /System/Library/Perl/Extras/5.16/darwin-thread-multi-2level /System/Library/Perl/Extras/5.16 .) at snpgenie_within_group.pl line 62. BEGIN failed--compilation aborted at snpgenie_within_group.pl line 62. Do you have any idea what I can do to fix it? Thanks!!! Jan 9, 2020
@singing-scientist
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Greetings! Unfortunately, I do not yet have sufficient details to answer. Did you use CPAN to install ForkManager?

@jhillung
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jhillung commented Jan 13, 2020 via email

@singing-scientist
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I am very glad to hear that it worked out! Thanks for using SNPGenie :-)

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