Merge branch 'fstrozzi-master'

chmille4 · Jan 12, 2011 · d56ad57 · d56ad57
2 parents 0ec7eb3 + f73a67a
commit d56ad57
Showing 1 changed file with 2 additions and 1 deletion.
diff --git a/lib/bio-assembly/caf.rb b/lib/bio-assembly/caf.rb
@@ -50,7 +50,8 @@ def parse_blocks(line,feat)
       def parse_dna(feat)
         feat[:seq] = @file.gets("\n\n").tr("\n","")
         newline = @file.gets
-        feat[:qual] = @file.gets("\n\n").tr("\n"," ").rstrip if newline.start_with?("BaseQuality")
+        keywords = newline.split("\s")
+        feat[:qual] = @file.gets("\n\n").tr("\n"," ").rstrip if keywords[0] == "BaseQuality"
         feat[:parsed] = true if feat[:type] == :contig
       end