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YHP: a software for predicting Y haplogroups based on Y-STRs

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YHP-Y-Haplogroup-Predictor-

Implement for YHP: a software for predicting Y haplogroups based on Y-STRs

Run by user-friendly software

The packaged software is avaliable at https://drive.google.com/file/d/1fXHWb3rV41IwMgz_k9sWU63MKINwr8em/view?usp=sharing (YHP For Chinese users: https://pan.baidu.com/s/1J6EPpwgp-aLiwSEfk1C3uA password: szw3).

step1. Unzip.

step2. Double click YHP_Y_Haplogroup_Predictor_.jar.

Run in command line

The code is avaliable at https://github.com/cissy123/YHP-Y-Haplogroup-Predictor-.

CONFIGURE:JAVA1.8+PYTHON3.6

step1.Download jars from https://drive.google.com/file/d/1EP1DjL7ck6Ky_8Zefdt501fUVM-L7NcJ/view?usp=sharing (java package For Chinese users: https://pan.baidu.com/s/17qoNbK7oDRCGGHUljxaksQ password:x9ik), then configure.

step2. unzip trained_DATABASE_model to current folder.

step3.Run /src/main/Main.java

Attention

  1. File path mustnot contain spaces.
  2. File type must be Excel 97-2003 .xls.
  3. Multi-copy loci should be treated as separate single loci.

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