Skip to content

This is the development home of the workflow management system Snakemake. For general information, see

License

Notifications You must be signed in to change notification settings

cjops/snakemake

 
 

Repository files navigation

Gitpod Ready-to-Code test status Sonarcloud Status Bioconda Pypi docker container status Stack Overflow Twitter Discord Github stars Contributor Covenant

Snakemake

The Snakemake workflow management system is a tool to create reproducible and scalable data analyses. Snakemake is highly popular, with on average more than 6 new citations per week, and over 200k downloads. Workflows are described via a human readable, Python based language. They can be seamlessly scaled to server, cluster, grid and cloud environments without the need to modify the workflow definition. Finally, Snakemake workflows can entail a description of required software, which will be automatically deployed to any execution environment.

Homepage: https://snakemake.github.io

Copyright (c) 2012-2021 Johannes Köster johannes.koester@uni-due.com (see LICENSE)

About

This is the development home of the workflow management system Snakemake. For general information, see

Resources

License

Code of conduct

Stars

Watchers

Forks

Packages

 
 
 

Languages

  • HTML 61.2%
  • Python 37.4%
  • Jinja 0.9%
  • Vim Script 0.1%
  • Jupyter Notebook 0.1%
  • Rust 0.1%
  • Other 0.2%