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Merge pull request #43 from arfon/patch-1
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JOSS fixes
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cokelaer committed Oct 25, 2017
2 parents 1baa329 + 9f1f086 commit 19905c5
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10 changes: 2 additions & 8 deletions doc/joss/paper.bib
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@@ -1,4 +1,3 @@

@book{marple:1987,
address = {Australia, Sydney},
author = {Marple, S. L.},
Expand Down Expand Up @@ -35,7 +34,7 @@ @article{welch:1967
volume = 15,
number = 2,
pages = {70--73},
title = {The use of fast Fourier transform for the estimation of power spectra: a method based on time averaging over short, modified periodograms}
title = {The use of fast Fourier transform for the estimation of power spectra: a method based on time averaging over short, modified periodograms},
year = 1967
}

Expand All @@ -53,7 +52,7 @@ @article{matplotlib:2007
title = {Matplotlib: A 2D Graphics Environment},
year = {2007},
journal= {Computing in Science \& Engineering},
volume = {9}
volume = {9},
pages = {90-95},
doi = {DOI:10.1109/MCSE.2007.55}
}
Expand All @@ -67,8 +66,3 @@ @article{numpy:2011
year = {2011},
doi = {DOI:10.1109/MCSE.2011.37}
}





15 changes: 7 additions & 8 deletions doc/joss/paper.md
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---
title: 'Spectrum': Spectral Analysis in Python
title: "'Spectrum': Spectral Analysis in Python"
tags:
- spectral analysis
- periodogram
Expand All @@ -16,24 +16,23 @@ authors:
- name: Juergen Hasch
orcid: 0000-0002-9457-1220
affiliation: 2
affiliations:
- name: Institut Pasteur - Bioinformatics and Biostatistics Hub - C3BI, USR 3756 IP
CNRS - Paris, France
affiliations:
- name: Institut Pasteur - Bioinformatics and Biostatistics Hub - C3BI, USR 3756 IP CNRS - Paris, France
index: 1
- name: Robert Bosch GmbH: Renningen, Baden-Württemberg, Germany
- name: "Robert Bosch GmbH: Renningen, Baden-Württemberg, Germany"
index: 2
date: 2 August 2017
bibliography: paper.bib
---

# Summary

**Spectrum** is a Python library that includes tools to estimate Power Spectral Densities. Although the use of
**Spectrum** is a Python library that includes tools to estimate Power Spectral Densities. Although the use of
power spectrum of a signal is fundamental in electrical engineering (e.g. radio communications, radar), it has
a wide range of applications from cosmology (e.g., detection of gravitational waves in 2016), to music
a wide range of applications from cosmology (e.g., detection of gravitational waves in 2016), to music
(pattern detection) or biology (mass spectroscopy).

Methods available are based on Fourier transform, parametric methods or eigenvalues analysis. Although standard methods such as
Methods available are based on Fourier transform, parametric methods or eigenvalues analysis. Although standard methods such as
periodogram are available, less common methods (e.g. multitapering) are also implemented:

- The Fourier methods are based upon correlogram, periodogram and Welch estimates. Standard tapering windows (Hann, Hamming, Blackman) and more exotic ones are available (DPSS, Taylor, ...)[harris:1978],[welch:1967],[marple:1987].
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