Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Reimplement predict library #219

Merged
merged 15 commits into from
May 8, 2024
Merged

Reimplement predict library #219

merged 15 commits into from
May 8, 2024

Commits on May 3, 2024

  1. Initial restructuring of fasta2speclib for predict-library

    @RalfG
    RalfG committed May 3, 2024
    Configuration menu
    Copy the full SHA
    683d52d View commit details
    Browse the repository at this point in the history

Commits on May 6, 2024

  1. working predict_library and csv output

    @rodvrees
    rodvrees committed May 6, 2024
    Configuration menu
    Copy the full SHA
    4cf2fde View commit details
    Browse the repository at this point in the history

Commits on May 7, 2024

  1. Functional .msp output

    @rodvrees
    rodvrees committed May 7, 2024
    Configuration menu
    Copy the full SHA
    c6073e1 View commit details
    Browse the repository at this point in the history

  2. unset normalization defaults

    @rodvrees
    rodvrees committed May 7, 2024
    Configuration menu
    Copy the full SHA
    b89b0fb View commit details
    Browse the repository at this point in the history

  3. Continue predict-library implementation; add tests

    @RalfG
    RalfG committed May 7, 2024
    Configuration menu
    Copy the full SHA
    8bf8641 View commit details
    Browse the repository at this point in the history

  4. search_space: Add docs, better define api; restructure

    @RalfG
    RalfG committed May 7, 2024
    Configuration menu
    Copy the full SHA
    dfceb3d View commit details
    Browse the repository at this point in the history

  5. Merge branch 'reimplement-predict-library' of https://github.com/comp… 

    …omics/ms2pip_c into reimplement-predict-library
    @RalfG
    RalfG committed May 7, 2024
    Configuration menu
    Copy the full SHA
    7916326 View commit details
    Browse the repository at this point in the history

Commits on May 8, 2024

  1. Merge branch 'v4.0.0' of https://github.com/compomics/ms2pip_c into r… 

    …eimplement-predict-library
    @RalfG
    RalfG committed May 8, 2024
    Configuration menu
    Copy the full SHA
    a959f75 View commit details
    Browse the repository at this point in the history

  2. Implement spectrum-output for predict-library

    @RalfG
    RalfG committed May 8, 2024
    Configuration menu
    Copy the full SHA
    a879808 View commit details
    Browse the repository at this point in the history

  3. Avoid memory issues by converting to Peptidoforms lazily

    @RalfG
    RalfG committed May 8, 2024
    Configuration menu
    Copy the full SHA
    66c5c2a View commit details
    Browse the repository at this point in the history

  4. Remove obsolete tests; fix search space test imports

    @RalfG
    RalfG committed May 8, 2024
    Configuration menu
    Copy the full SHA
    345ccd8 View commit details
    Browse the repository at this point in the history

  5. CI: Reinstate tests

    @RalfG
    RalfG committed May 8, 2024
    Configuration menu
    Copy the full SHA
    b09f4e9 View commit details
    Browse the repository at this point in the history

  6. Remove unused import; clean up test imports

    @RalfG
    RalfG committed May 8, 2024
    Configuration menu
    Copy the full SHA
    92088fa View commit details
    Browse the repository at this point in the history

  7. Fix test workflow

    @RalfG
    RalfG committed May 8, 2024
    Configuration menu
    Copy the full SHA
    7ac939c View commit details
    Browse the repository at this point in the history

  8. Fix search_space_test

    @RalfG
    RalfG committed May 8, 2024
    Configuration menu
    Copy the full SHA
    5d1f11a View commit details
    Browse the repository at this point in the history