build hkl.3001 #13
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build hkl.3001 #13
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Hi! This is the friendly automated conda-forge-linting service. I just wanted to let you know that I linted all conda-recipes in your PR ( |
5 tasks
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@conda-forge-admin, please rerender |
…nda-forge-pinning 2023.03.18.10.09.36
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Need to update the patch Hunk #1 succeeded at 164 with fuzz 2 (offset 22 lines).
Hunk #2 FAILED at 210.
1 out of 2 hunks FAILED
Warning: failed to download source. If building, will try again after downloading recipe dependencies.
Error was:
Command '['/opt/conda/bin/patch', '--no-backup-if-mismatch', '--batch', '-Np1', '-i', '/tmp/tmph0ibinfn/no-docs.patch.native', '--binary', '--dry-run']' returned non-zero exit status 1.
Traceback (most recent call last):
File "/opt/conda/bin/conda-mambabuild", line 10, in <module>
sys.exit(main())
File "/opt/conda/lib/python3.10/site-packages/boa/cli/mambabuild.py", line 256, in main
call_conda_build(action, config)
File "/opt/conda/lib/python3.10/site-packages/boa/cli/mambabuild.py", line 228, in call_conda_build
result = api.build(
File "/opt/conda/lib/python3.10/site-packages/conda_build/api.py", line 180, in build
return build_tree(
File "/opt/conda/lib/python3.10/site-packages/conda_build/build.py", line 3097, in build_tree
packages_from_this = build(metadata, stats,
File "/opt/conda/lib/python3.10/site-packages/conda_build/build.py", line 2136, in build
try_download(m, no_download_source=False, raise_error=True)
File "/opt/conda/lib/python3.10/site-packages/conda_build/render.py", line 656, in try_download
raise RuntimeError("Failed to download or patch source. Please see build log for info.")
RuntimeError: Failed to download or patch source. Please see build log for info.
##[error]Bash exited with code '1'.
Finishing: Run docker build |
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In the patch: -dnl *** gtk-doc ***
-GTK_DOC_CHECK([1.9],[--flavour no-tmpl])This patch could remain but the @@ -213,12 +210,6 @@ AC_CONFIG_FILES([Makefile
tests/Makefile
tests/bindings/Makefile
tests/tap/Makefile
- Documentation/Makefile
- Documentation/hkl.org
- Documentation/api/Makefile
- Documentation/figures/Makefile
- Documentation/sphinx/Makefile
- Documentation/sphinx/source/conf.py
gui/Makefile
data/Makefile
contrib/MakefileThis code has relocated and changed. This patch should be re-generated. |
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Still this CI error: Not sure how to resolve. |
prjemian
added a commit
that referenced
this pull request
Mar 28, 2023
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Didn't work as expected: |
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The way past this point is to install export HDF5_CFLAGS=" -I${CONDA_PREFIX}/include" \
export HDF5_LIBS=" -L${CONDA_PREFIX}/lib -lhdf5" \ |
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@conda-forge-admin, please rerender |
…nda-forge-pinning 2023.03.28.18.53.36
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This faliure: /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -DG_LOG_DOMAIN=\"Hkl\" -I.. -I.. -I../third-party/ -ftrack-macro-expansion=0 -I/root/miniconda/include -I/root/miniconda/include -I/root/miniconda/include/glib-2.0 -I/root/miniconda/lib/glib-2.0/include -I/root/miniconda/include -Wall -g -O2 -MT hkl-engine-template.lo -MD -MP -MF $depbase.Tpo -c -o hkl-engine-template.lo hkl-engine-template.c &&\
mv -f $depbase.Tpo $depbase.Plo
/bin/bash: line 1: --template: command not found
make[3]: *** [Makefile:1552: stamp-hkl-type-builtins.h] Error 127is due to these lines in stamp-hkl-type-builtins.h: $(hkl_public_h_sources) $(srcdir)/hkl-type-builtins.h.template
( cd $(srcdir) && $(GLIB_MKENUMS) --template hkl-type-builtins.h.template \Specifically, the |
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Latest failure: ModuleNotFoundError: No module named 'giscanner._giscanner' 2023-03-28T21:21:55.5414492Z libtool: link: ( cd ".libs" && rm -f "libhkl.la" && ln -s "../libhkl.la" "libhkl.la" )
2023-03-28T21:21:55.5463192Z CPPFLAGS="-DNDEBUG -D_FORTIFY_SOURCE=2 -O2 -isystem $PREFIX/include" CFLAGS="-Wall -march=nocona -mtune=haswell -ftree-vectorize -fPIC -fstack-protector-strong -fno-plt -O2 -ffunction-sections -pipe -isystem $PREFIX/include -fdebug-prefix-map=$SRC_DIR=/usr/local/src/conda/hkl-5.0.0.3001 -fdebug-prefix-map=$PREFIX=/usr/local/src/conda-prefix" LDFLAGS="-Wl,-O2 -Wl,--sort-common -Wl,--as-needed -Wl,-z,relro -Wl,-z,now -Wl,--disable-new-dtags -Wl,--gc-sections -Wl,--allow-shlib-undefined -Wl,-rpath,$PREFIX/lib -Wl,-rpath-link,$PREFIX/lib -L$PREFIX/lib" CC="$BUILD_PREFIX/bin/x86_64-conda-linux-gnu-cc" PKG_CONFIG="$BUILD_PREFIX/bin/x86_64-conda-linux-gnu-pkg-config" GI_HOST_OS="" DLLTOOL="false" $PREFIX/bin/g-ir-scanner --add-include-path=. --add-include-path=. --warn-all --namespace=Hkl --nsversion=5.0 --libtool="/bin/sh ../libtool" --pkg=gobject-2.0 --pkg-export=hkl-5.0 --library=libhkl.la --warn-all --c-include='hkl.h' --cflags-begin -DG_LOG_DOMAIN=\"Hkl\" -I.. -I.. -I../third-party/ -ftrack-macro-expansion=0 -I$PREFIX/include/glib-2.0 -I$PREFIX/lib/glib-2.0/include -I$PREFIX/include -I$BUILD_PREFIX/include -I$PREFIX/include -I$PREFIX/include/glib-2.0 -I$PREFIX/lib/glib-2.0/include -I$PREFIX/include --cflags-end ../hkl.h hkl-binding-private.h hkl-types.h hkl-vector.c hkl-matrix.c hkl-quaternion.c hkl-parameter.c hkl-axis.c hkl-geometry.c hkl-detector.c hkl-detector-factory.c hkl-lattice.c hkl-sample.c hkl-pseudoaxis.c hkl-factory.c hkl-binding.c hkl-types.c hkl-type-builtins.c hkl-type-builtins.h $PREFIX/bin/g-ir-scanner libhkl.la Makefile --output Hkl-5.0.gir
2023-03-28T21:21:55.6462585Z Traceback (most recent call last):
2023-03-28T21:21:55.6464146Z File "/home/conda/feedstock_root/build_artifacts/hkl_1680038274201/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/bin/g-ir-scanner", line 98, in <module>
2023-03-28T21:21:55.6464811Z from giscanner.scannermain import scanner_main
2023-03-28T21:21:55.6465744Z File "/home/conda/feedstock_root/build_artifacts/hkl_1680038274201/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/gobject-introspection/giscanner/scannermain.py", line 35, in <module>
2023-03-28T21:21:55.6466683Z from giscanner.ast import Include, Namespace
2023-03-28T21:21:55.6467593Z File "/home/conda/feedstock_root/build_artifacts/hkl_1680038274201/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/gobject-introspection/giscanner/ast.py", line 29, in <module>
2023-03-28T21:21:55.6468757Z from .sourcescanner import CTYPE_TYPEDEF, CSYMBOL_TYPE_TYPEDEF
2023-03-28T21:21:55.6469908Z File "/home/conda/feedstock_root/build_artifacts/hkl_1680038274201/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/lib/gobject-introspection/giscanner/sourcescanner.py", line 34, in <module>
2023-03-28T21:21:55.6470842Z from giscanner._giscanner import SourceScanner as CSourceScanner
2023-03-28T21:21:55.6471366Z ModuleNotFoundError: No module named 'giscanner._giscanner'
2023-03-28T21:21:55.6602054Z make[3]: *** [/home/conda/feedstock_root/build_artifacts/hkl_1680038274201/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placeho/share/gobject-introspection-1.0/Makefile.introspection:156: Hkl-5.0.gir] Error 1
2023-03-28T21:21:55.6608979Z make[3]: Leaving directory '$SRC_DIR/hkl'
2023-03-28T21:21:55.6611669Z make[2]: *** [Makefile:1181: all-recursive] Error 1
2023-03-28T21:21:55.6612463Z make[2]: Leaving directory '$SRC_DIR/hkl'
2023-03-28T21:21:55.6626350Z make[1]: *** [Makefile:566: all-recursive] Error 1
2023-03-28T21:21:55.6627513Z make[1]: Leaving directory '$SRC_DIR'
2023-03-28T21:21:55.6630835Z make: *** [Makefile:450: all] Error 2
2023-03-28T21:21:56.0569448Z Traceback (most recent call last):
2023-03-28T21:21:56.0570394Z File "/opt/conda/bin/conda-mambabuild", line 10, in <module>
2023-03-28T21:21:56.0579287Z sys.exit(main())
2023-03-28T21:21:56.0580297Z File "/opt/conda/lib/python3.10/site-packages/boa/cli/mambabuild.py", line 256, in main
2023-03-28T21:21:56.0580827Z call_conda_build(action, config)
2023-03-28T21:21:56.0581241Z File "/opt/conda/lib/python3.10/site-packages/boa/cli/mambabuild.py", line 228, in call_conda_build
2023-03-28T21:21:56.0582379Z result = api.build(
2023-03-28T21:21:56.0583098Z File "/opt/conda/lib/python3.10/site-packages/conda_build/api.py", line 180, in build
2023-03-28T21:21:56.0592526Z return build_tree(
2023-03-28T21:21:56.0593755Z File "/opt/conda/lib/python3.10/site-packages/conda_build/build.py", line 3078, in build_tree
2023-03-28T21:21:56.0615761Z packages_from_this = build(metadata, stats,
2023-03-28T21:21:56.0616399Z File "/opt/conda/lib/python3.10/site-packages/conda_build/build.py", line 2198, in build
2023-03-28T21:21:56.0627506Z utils.check_call_env(cmd, env=env, rewrite_stdout_env=rewrite_env,
2023-03-28T21:21:56.0629961Z File "/opt/conda/lib/python3.10/site-packages/conda_build/utils.py", line 451, in check_call_env
2023-03-28T21:21:56.0648182Z return _func_defaulting_env_to_os_environ("call", *popenargs, **kwargs)
2023-03-28T21:21:56.0649142Z File "/opt/conda/lib/python3.10/site-packages/conda_build/utils.py", line 427, in _func_defaulting_env_to_os_environ
2023-03-28T21:21:56.0649664Z raise subprocess.CalledProcessError(proc.returncode, _args)
2023-03-28T21:21:56.0650416Z subprocess.CalledProcessError: Command '['/bin/bash', '-o', 'errexit', '/home/conda/feedstock_root/build_artifacts/hkl_1680038274201/work/conda_build.sh']' returned non-zero exit status 2.
2023-03-28T21:22:01.6447863Z ##[error]Bash exited with code '1'.
2023-03-28T21:22:01.6495529Z ##[section]Finishing: Run docker build |
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In some other projects, this error has been resolved by |
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Coming to the same conclusion. I'm revising the test now to relax the extra asserts I just added. |
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Before I completely surrender on this, I'll ask AI for some assist. |
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Hi! This is the friendly automated conda-forge-linting service. I wanted to let you know that I linted all conda-recipes in your PR ( Here's what I've got... For recipe:
|
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Hi! This is the friendly automated conda-forge-linting service. I wanted to let you know that I linted all conda-recipes in your PR ( Here's what I've got... For recipe:
|
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Hi! This is the friendly automated conda-forge-linting service. I just wanted to let you know that I linted all conda-recipes in your PR ( |
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I think cf7a562 made sense. We needed to list the source files, per https://docs.conda.io/projects/conda-build/en/stable/resources/define-metadata.html#source-files. |
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That URL suggests the test be refactored into the style of |
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I second @klauer's suggestion to exclude the pypy builds for this project. |
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Lovely! |
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As @klauer said, CI is passing on all the workflows that matter to me. This one problem workflow has become a distraction since insufficient diagnostics are available to identify the root problem for this one workflow. |
So we just ignore the failing workflow or is there some action we take? |
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For example: conda-forge/staged-recipes#20694 |
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@conda-forge-admin, please rerender |
…nda-forge-pinning 2023.10.03.16.12.15
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BTW, found that way to exclude PyPY from a web search. |
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All enabled workflows have succeeded. Ready for review. Again. |
klauer
approved these changes
Oct 3, 2023
recipe/meta.yaml
Outdated
| skip: True # [py<36 or win or osx] | ||
| number: 0 | ||
| skip: true # [python_impl == 'pypy'] | ||
| skip: True # [py<38 or py>312 or win or osx] |
There was a problem hiding this comment.
I would have expected this to be in a single line with the python_impl == 'pypy' or but apparently either way works
Co-authored-by: Max Rakitin <mrakitin@users.noreply.github.com>
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@strempfer: These geometries will be part of the support with the new library version (code changes will be necessary for hklpy to expose them, so that upgrade will happen soon): |
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0(if the version changed)conda-smithy(Use the phrase@conda-forge-admin, please rerenderin a comment in this PR for automated rerendering)