SGE script config #1044
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SGE script config #1044
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./configure --sge-parameters='-pe smp $cores' creates sge_submit_workers with #$ -pe smp $cores in the worker submission script. --sge-parameters could be used several times at the command line. Each time specifies a line that should be copied at the top of sge_submit_workers. For Notre Dame, ./configure.afs has --sge-parameters='-pe smp $cores'.
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| if [ $specified_resources = 1 -a $SGE_WARNING = 1 ] | ||
| then | ||
| echo "Worker resources were manually specified. Remember to also describe your resources according to your local qsub system (e.g., -p '-pe smp 4'. See also the --sge-parameter configuration option.)" 1>&2 |
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Suggest that you explicitly name the "configure" script here, otherwise it may not be clear to the user.
Also add an item to the Makeflow manual explaining in more detail.
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Fixes #1040 (bugs and taxes!)
Adds --sge-parameter to configure, which can be used several times.
Prints a warning when resources are manually specified.
Uses the old options in configure.afs.
@nhazekam