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I see the following error when running the annotations notebook on binder:
TypeError Traceback (most recent call last) Cell In[4], line 1 ----> 1 get_miriam_resources().head() File /srv/conda/envs/notebook/lib/python3.10/site-packages/basico/model_info.py:3951, in get_miriam_resources() 3946 res = miriam.getMIRIAMResource(i) 3947 assert (isinstance(res, COPASI.CMIRIAMResource)) 3948 resources.append({ 3949 'resource': res.getMIRIAMDisplayName(), 3950 'is_citation': res.getMIRIAMCitation(), -> 3951 'uri': res.getIdentifiersOrgURL() 3952 }) 3953 except AttributeError: 3954 logger.error("Couldn't retrieve list of miriam resources, please update the python-copasi version") TypeError: CMIRIAMResource.getIdentifiersOrgURL() missing 1 required positional argument: 'compact'
The text was updated successfully, but these errors were encountered:
Thanks for letting me know, a new parameter was added in COPASI 4.36 and I didn't realize. I'll make a new release for this!
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#34 : add compact parameter that was added in COPASI 4.36
6ddf2cc
This was released with release 0.51 thank you
da54354
fbergmann
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I see the following error when running the annotations notebook on binder:
The text was updated successfully, but these errors were encountered: