Skip to content
This repository has been archived by the owner on Jul 31, 2018. It is now read-only.

coregenomics/singularity-kmap

Folders and files

NameName
Last commit message
Last commit date

Latest commit

 

History

2 Commits
 
 
 
 
 
 
 
 

Repository files navigation

kmap singularity image

Build the singularity container for the kmap R package:

./build.sh

Requires sudo access on the host computer and singularity installed.

Why singularity and not spack?

While spack would have been nicer to administer, it turns out the R built-in socket communication for multicore processing on R 3.4.1 fails on RHEL 6.7. Additionally the number of the R packages with poorly written configure scripts makes maintenance difficult. Here is the abandoned installation script for reference.

About

Singularity container for the kmap R package

Resources

Stars

Watchers

Forks

Releases

No releases published

Packages

No packages published

Languages