feat (patientconsultation): added icd11_provisional_diagnoses #1022

khavinshankar · 2022-09-13T02:04:12Z

Added provisional diagnosis field support in patient consultation

Proposed Changes

added icd11_provisional_diagnoses array field in patient consultation and made migrations
added icd11_provisional_diagnoses and icd11_provisional_diagnoses_object to the api response in patient consultation

Associated Issue

Added provisional diagnosis in Consultation care_fe#3564 (front end pr)
Provisional Diagnosis in Consultation Form care_fe#3526 (issue)

@coronasafe/code-reviewers

Merge Checklist

Tests added/fixed
Update docs in /docs
Linting Complete

codecov-commenter · 2022-09-13T02:09:43Z

Codecov Report

Merging #1022 (e89f9f7) into master (99f3732) will increase coverage by 3.17%.
The diff coverage is 16.66%.

@@            Coverage Diff             @@
##           master    #1022      +/-   ##
==========================================
+ Coverage   52.67%   55.85%   +3.17%     
==========================================
  Files         183      171      -12     
  Lines        8937     8554     -383     
  Branches        0     1475    +1475     
==========================================
+ Hits         4708     4778      +70     
+ Misses       4229     3727     -502     
- Partials        0       49      +49

Impacted Files	Coverage Δ
...e/facility/api/serializers/patient_consultation.py	`32.04% <11.76%> (-2.11%)`	⬇️
care/facility/models/patient_consultation.py	`95.23% <100.00%> (-1.54%)`	⬇️
care/utils/filters/choicefilter.py	`75.00% <0.00%> (-6.25%)`	⬇️
config/urls.py	`78.26% <0.00%> (-4.35%)`	⬇️
config/settings/base.py	`90.29% <0.00%> (-3.41%)`	⬇️
care/utils/models/jsonfield.py	`23.07% <0.00%> (-2.57%)`	⬇️
care/facility/models/shifting.py	`76.78% <0.00%> (-1.79%)`	⬇️
care/facility/models/resources.py	`76.78% <0.00%> (-1.79%)`	⬇️
care/facility/models/patient_sample.py	`71.05% <0.00%> (-1.32%)`	⬇️
... and 40 more

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vigneshhari · 2022-09-14T14:14:08Z

Can you abstract the methods used to interact with the icd11 objects?

* cleanup admitted_to * moved BedType out of med model * fixed CSV fields for patient summary * fix patent summarization * avoid Redefining built-in 'filter' * refactor * removed admitted_to reference from tests * revert the removal of bed counts from district patient summary * remove setup.cfg * run pre-commit Co-authored-by: Ashesh3 <3626859+Ashesh3@users.noreply.github.com>

return file extension from file upload views

…d Consultation (#1007) * step 1. deprecate covid category renames existing `CATEGORY_CHOICES` to `COVID_CATEGORY_CHOICES` * step 1. deprecate covid category rename `category` and `patient_category` in DailyRounds and Consultation to `deprecated_covid_category` * step 2: make migrations for deprecating patient cateogry to covid category * step 3: adds new `CATEGORY_CHOICES` * step 3: use new `CATEGORY_CHOICES` wherever required * step 4: make migrations for new fields - Adds `patient_category` in DailyRounds - Adds `category` in Consulation * empty commit