The CytobankBridgeR package contains various tools to interact with Cytobank in R. This includes scripts, algorithms, etc.
First, generate a personal access token (PAT). Check the box for repo to enable downloading private repos you have access to in R.
# Install from GitHub
# install.packages("devtools")
devtools::install_github("cytobank/CytobankR", auth_token="YOUR_PERSONAL_ACCESS_TOKEN_HERE")