increased count job to 48 hours

cribbslab · Jul 5, 2023 · 295c505 · 295c505
1 parent c6ffb7d
commit 295c505
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/tallytrin/pipeline_count.py b/tallytrin/pipeline_count.py
@@ -386,7 +386,7 @@ def mapping_gene(infile, outfile):
     else:
         statement = '''minimap2 -ax splice  -k 14 --sam-hit-only --secondary=no --junc-bed %(junc_bed)s %(genome_fasta)s %(infile)s > %(outfile)s  2> %(outfile)s.log'''
 
-    P.run(statement, job_memory="60G", job_options='-t 24:00:00')
+    P.run(statement, job_memory="60G", job_options='-t 48:00:00')
 
 
 @transform(mapping_gene,