Added human data folder in the data directory, and copied the counts …

…for both CCDS and GRCh37 from ~/iSG/indel-seq-gen/human_data folder
cstrope · Aug 20, 2012 · 6dae018 · 6dae018
1 parent 156da5b
commit 6dae018
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Showing 2 changed files with 4 additions and 4 deletions.
diff --git a/src/dependency.cpp b/src/dependency.cpp
@@ -20,7 +20,7 @@ Dependency::Dependency(
 void contextDependence::readDependencies(string& file)
 {
 	ifstream is;
-	char line[256];
+	char line[2096];
 	int i = 0;
 	string sequence;
 	double val;
@@ -33,7 +33,7 @@ void contextDependence::readDependencies(string& file)
 	is.open(file.c_str());
 	int num_lines = 0;
 	while(is.good()) {
-		is.getline(line, 256);
+		is.getline(line, 2096);
 		split_line = split (line, " ");
 		if (split_line.size() < 2) break;	// last line might have no values, will cause problems.
 

diff --git a/src/propose_path.cpp b/src/propose_path.cpp
@@ -111,8 +111,8 @@ PathProposal::displayPaths(
 
 void 
 PathProposal::parseEndpointInfile(
-									   string& filename
-									  )
+								  string& filename
+								 )
 {
 	ifstream infile;
 	string in_buffer = "";