Try to install into micromamba base env

ctmrbio · Nov 15, 2021 · 831f976 · 831f976
1 parent bd8e318
commit 831f976
Showing 1 changed file with 1 addition and 3 deletions.
diff --git a/envs/Singularity.stag-mwc b/envs/Singularity.stag-mwc
@@ -18,16 +18,14 @@ From: mambaorg/micromamba:0.17.0
 %labels
 	AUTHOR boulund
 	VERSION 2.0
-	CONDA_ENV /opt/conda/envs/stag-mwc-main
-	ENV_NAME stag-mwc-main
 
 %environment
     PATH=/opt/conda/envs/stag-mwc-main/bin:/opt/conda/bin:$PATH
     export PATH
 
 %post
 	# Install stag-mwc-main conda environment
-	micromamba install -y -f stag-mwc.yaml
+	micromamba install -y -n base -f stag-mwc.yaml
 	micromamba clean --yes --all
 
 %runscript